PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022737050.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 712aa    MW: 78495.1 Da    PI: 6.7016
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022737050.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.62.8e-202681156
                    TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    +++ +++t++q+++Le +F+++++p++++r +L+++lgL  rq+k+WFqNrR+++k
  XP_022737050.1 26 KKRYHRHTAHQIQRLEGMFKECPHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQMK 81
                    678899***********************************************998 PP
2START178.53.9e-562264472206
                     HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     +a  a++el+++ + +ep+W ks     + +n + + ++f+++++       ++ea+r+sgvv+m+   lv  ++d++ +W e ++     a+t+
  XP_022737050.1 226 VAANAMEELLRLLQTNEPLWIKSTndgrDVLNLESYERIFPRANThfkspnLRIEASRDSGVVIMNGLALVDMFMDSN-KWVELFPtivlMAKTI 319
                     67899*******************999999999*******99999*********************************.*******9999***** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     evissg      g lqlm+ elq+lsplv+ R+f+++Ry++q ++g w+iv vS d +q+ ++      +++lpSg+li++++ng+skvtwvehv
  XP_022737050.1 320 EVISSGmlsshsGSLQLMYEELQVLSPLVStREFYILRYCQQIEQGLWAIVNVSYDFPQFASQ----CQSHRLPSGCLIQDMPNGYSKVTWVEHV 410
                     ************************************************************986....88999*********************** PP

                     E--SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlp.hwllrslvksglaegaktwvatlqrqcek 206
                     + ++++p h l+r l++ gla+ga +w+atlqr ce+
  XP_022737050.1 411 EIEDKTPtHRLYRDLIHGGLAFGAERWLATLQRMCER 447
                     ***********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 712 aa     Download sequence    
MEYGSGGGGG SGSGGDHDAS DPSRRKKRYH RHTAHQIQRL EGMFKECPHP DEKQRLQLSR  60
ELGLAPRQIK FWFQNRRTQM KAQHERADNC SLRAENDKIR CENIAIREAL KNVICPSCGG  120
PHVSEDSYFD DQKLRMENAQ LKEELDRVSS IAAKYIGRPL SQLPPVQPIH ISSLDLRMAS  180
FDGHGIGVAA PSLDLDLLPG SSSSMPNLPF QPVVISDMDK SLMTDVAANA MEELLRLLQT  240
NEPLWIKSTN DGRDVLNLES YERIFPRANT HFKSPNLRIE ASRDSGVVIM NGLALVDMFM  300
DSNKWVELFP TIVLMAKTIE VISSGMLSSH SGSLQLMYEE LQVLSPLVST REFYILRYCQ  360
QIEQGLWAIV NVSYDFPQFA SQCQSHRLPS GCLIQDMPNG YSKVTWVEHV EIEDKTPTHR  420
LYRDLIHGGL AFGAERWLAT LQRMCERFAC LMVSGTSTRD LGGVIPSPDG KRSMMKLAQR  480
MVNNFCTSIS TSNSHRWTTL LGLNEVGVRV TVHKSSDPGQ PNGVVLSAAT TFWLPVTPQN  540
VFNFFKDERT RPQWDVLSNG NAVQEVAHIA NGSHPGNCIS VLRAFNTSQN NMLILQESCI  600
DNSGSLVVYC PVDLPAINVA MSGEDPSYIP LLPSGFTISP DGHPDQGDGA STSSSSHGNM  660
GKSGGSLITV AFQILVSSLP SAKLNLESVT TVNNLIGNTV QQIKAALNCP SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0HD-ZIP family protein