PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022737108.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 212aa MW: 24345.9 Da PI: 10.03

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022737108.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	92.4	2.2e-29	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRr g+lKKA ELSvLCdaev+viifs++g++yeyss XP_022737108.1 9 KRIENATSRQVTFSKRRSGLLKKARELSVLCDAEVSVIIFSQKGRVYEYSS 59 79***********************************************96 PP
2	K-box	72.2	1.5e-24	82	170	9	97
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 e+ +++l+ e+a++ ++ie L+ +qR+llG++L+ +s+ eL+++e+qLe+sl++iR++K +ll+eqie+l+ ke+ lqeen +L++k XP_022737108.1 82 EMERYTQQLRLEAANMVRKIELLEVSQRKLLGQGLGLCSVDELHEVESQLERSLRNIRARKGHLLKEQIEQLKAKERFLQEENAKLSEK 170 66788999******************************************************************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MVRGKIQMKR IENATSRQVT FSKRRSGLLK KARELSVLCD AEVSVIIFSQ KGRVYEYSSS 60 DMQKAIERYS KYIKEVQNDK PEMERYTQQL RLEAANMVRK IELLEVSQRK LLGQGLGLCS 120 VDELHEVESQ LERSLRNIRA RKGHLLKEQI EQLKAKERFL QEENAKLSEK SGGGQWQLLT 180 QQKEAVTCSG QRSQSSEVET GLFIGLPENR GV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62165.3	2e-80	MIKC_MADS family protein