PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022737109.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 174aa MW: 20309.3 Da PI: 10.1022

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022737109.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	92.9	1.5e-29	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRr g+lKKA ELSvLCdaev+viifs++g++yeyss XP_022737109.1 9 KRIENATSRQVTFSKRRSGLLKKARELSVLCDAEVSVIIFSQKGRVYEYSS 59 79***********************************************96 PP
2	K-box	53.8	8.5e-19	82	157	9	84
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkke 84 e+ +++l+ e+a++ ++ie L+ +qR+llG++L+ +s+ eL+++e+qLe+sl++iR++K+++l e+ +l +k XP_022737109.1 82 EMERYTQQLRLEAANMVRKIELLEVSQRKLLGQGLGLCSVDELHEVESQLERSLRNIRARKERFLQEENAKLSEKV 157 66788999************************************************************99988875 PP

Sequence ? help Back to Top
Protein Sequence Length: 174 aa Download sequence
MVRGKIQMKR IENATSRQVT FSKRRSGLLK KARELSVLCD AEVSVIIFSQ KGRVYEYSSS 60 DMQKAIERYS KYIKEVQNDK PEMERYTQQL RLEAANMVRK IELLEVSQRK LLGQGLGLCS 120 VDELHEVESQ LERSLRNIRA RKERFLQEEN AKLSEKVIPS FQNSIHIFTT SHES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62165.4	2e-69	MIKC_MADS family protein