PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022737141.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HD-ZIP

Protein Properties

Length: 243aa MW: 28098.4 Da PI: 6.5312

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022737141.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.6	5.2e-19	36	90	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++++f++eq++ Le +Fe+++ p + +LA++lgL+ rq+ +WFqNrRa+ k XP_022737141.1 36 KNKRRFSDEQIKSLEFMFESDSRPESMIKHQLANELGLQPRQIAIWFQNRRARSK 90 67889************************************************99 PP
2	HD-ZIP_I/II	114.9	4.9e-37	37	128	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +krr+s+eq+k+LE +Fe++++ e+ K++la+eLglqprq+a+WFqnrRAR ktkq+E+dy+ Lk++ydal+++ e+L++e+++L +l++ XP_022737141.1 37 NKRRFSDEQIKSLEFMFESDSRPESMIKHQLANELGLQPRQIAIWFQNRRARSKTKQIERDYNILKKSYDALASSYESLKRENQSLSIQLQK 128 79*************************************************************************************99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MREQLQAVAT VKVELGLYGL DQDMHPPITN VRPNNKNKRR FSDEQIKSLE FMFESDSRPE 60 SMIKHQLANE LGLQPRQIAI WFQNRRARSK TKQIERDYNI LKKSYDALAS SYESLKRENQ 120 SLSIQLQKLK SQLEMEHGNK TYGPNRTAGN SGDGKSGNMS AIFDAKEKIT FLFEGYDHML 180 SSDKNSRNVE STDEDRVVLE VMETRDGSLT SSEKWCGFES NCFLDESSCS SNWWEYWLRL 240 NGN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	85	93	RRARSKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46680.2	1e-37	HD-ZIP family protein