PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022737165.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 190aa    MW: 20547.1 Da    PI: 6.4889
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022737165.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260141.72.4e-4412110199
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrrkC+++C++apyfp e+p+kf nvhk+FGasnv+kll++l +++reda++sl+yeAear+rdPvyG+vg i+ lq+q+++l++el+
  XP_022737165.1  12 PCAACKLLRRKCVPGCIFAPYFPPEEPQKFVNVHKIFGASNVSKLLTDLLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELD 106
                     7*********************************************************************************************9 PP

          DUF260  96 llke 99 
                     ++++
  XP_022737165.1 107 AANA 110
                     9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MASSSCSSYN SPCAACKLLR RKCVPGCIFA PYFPPEEPQK FVNVHKIFGA SNVSKLLTDL  60
LPHQREDAVN SLAYEAEARV RDPVYGCVGA ISFLQRQVQR LQKELDAANA DLIRYACNEI  120
PTALPAAAGA SSSVQPLTPP NRRGEFDRRI GNEGGGLYQP PGAFPLPYYS YPWNDNSSGD  180
MNDGGGEGGM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63090.21e-62LBD family protein