PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022737219.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 672aa MW: 75678.5 Da PI: 8.3221

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022737219.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.2	6.7e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l+++++ +G g+W+ ++++ g+ R++k+c++rw +yl XP_022737219.1 14 RGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYL 61 788*******************************************97 PP
2	Myb_DNA-binding	51.8	1.8e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr+T+eE++l++ ++ G++ W+ Ia++++ gRt++++k++w+++ XP_022737219.1 67 RGRFTPEEEKLIISLHGVVGNR-WAHIASHLP-GRTDNEIKNYWNSW 111 89******************.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 672 aa Download sequence
MGHHSCCNQQ KVKRGLWSPE EDEKLIRYIT THGYGCWSEV PEKAGLQRCG KSCRLRWINY 60 LRPDIRRGRF TPEEEKLIIS LHGVVGNRWA HIASHLPGRT DNEIKNYWNS WIKKKIRKPS 120 APPTNTAPCT DQHSQINYAS NQLELVNQDL TTRAVVPTQE TLFSSPGAPL FMFDTTPIDG 180 IQDANVRGEL FIESANINTT ETWNLNQHQV QAFPPSTSFT TGMDTNNYLP PLVENMEINI 240 APIEVQSCTG IDEEGEMTLE CLQRQQQELN AWVESQQCSN FLFWDNIEGQ LSGEAMPPTS 300 SNMGTTLSSF PSAFEKNSLF FFSFLLFASL LVISFCIRNI TRYCYLVCLV FMITEWSTGL 360 PDELLLPDHL MKSSLKKGKM SNKKSELIMQ QGHIYRKRVL FELLIIVSAV LDLSPLVKQP 420 ARILCHIANS RITINCLDFQ DKMIKVRASL NAQTLENWFN VGFSVICDKR AEGKSLLSQQ 480 TLFAAVPYLI AIMIIPEKNR REISKYLFQE GVCYAKKDYN LAKHPEIDVP NLQVIKLMQS 540 FKSKEYVRET FAWMHYYWYL TNDGIEFLRT YLNLPSEIVP ATLKKQTKPA GRPMGPPGDR 600 PRGPPRFGDG ERRFGDRDGY RGGPRGGGDF GDKGGAPADY QPSFRGPGSR PAFGRGGGGY 660 GGAGPAGGAG LP

Sequence ? help Back to Top

Protein Sequence Length: 672 aa Download sequence

MGHHSCCNQQ KVKRGLWSPE EDEKLIRYIT THGYGCWSEV PEKAGLQRCG KSCRLRWINY  60
LRPDIRRGRF TPEEEKLIIS LHGVVGNRWA HIASHLPGRT DNEIKNYWNS WIKKKIRKPS  120
APPTNTAPCT DQHSQINYAS NQLELVNQDL TTRAVVPTQE TLFSSPGAPL FMFDTTPIDG  180
IQDANVRGEL FIESANINTT ETWNLNQHQV QAFPPSTSFT TGMDTNNYLP PLVENMEINI  240
APIEVQSCTG IDEEGEMTLE CLQRQQQELN AWVESQQCSN FLFWDNIEGQ LSGEAMPPTS  300
SNMGTTLSSF PSAFEKNSLF FFSFLLFASL LVISFCIRNI TRYCYLVCLV FMITEWSTGL  360
PDELLLPDHL MKSSLKKGKM SNKKSELIMQ QGHIYRKRVL FELLIIVSAV LDLSPLVKQP  420
ARILCHIANS RITINCLDFQ DKMIKVRASL NAQTLENWFN VGFSVICDKR AEGKSLLSQQ  480
TLFAAVPYLI AIMIIPEKNR REISKYLFQE GVCYAKKDYN LAKHPEIDVP NLQVIKLMQS  540
FKSKEYVRET FAWMHYYWYL TNDGIEFLRT YLNLPSEIVP ATLKKQTKPA GRPMGPPGDR  600
PRGPPRFGDG ERRFGDRDGY RGGPRGGGDF GDKGGAPADY QPSFRGPGSR PAFGRGGGGY  660
GGAGPAGGAG LP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G63910.1	1e-101	MYB family protein