PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022737259.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 368aa MW: 41802.6 Da PI: 6.6711

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022737259.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52	1.6e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++++++G g+W+++++ g+ R++k+c++rw +yl XP_022737259.1 14 KGLWSPEEDEKLFNYITRFGVGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	46.3	9.8e-15	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E++l++ +++ lG++ W+ Ia+ ++ gRt++++k++w++ XP_022737259.1 67 RGMFSQQEEDLIISLHEVLGNR-WAQIAAQLP-GRTDNEIKNFWNS 110 788*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MRRHSCCLKQ KLRKGLWSPE EDEKLFNYIT RFGVGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGMF SQQEEDLIIS LHEVLGNRWA QIAAQLPGRT DNEIKNFWNS CLKKKLMKQG 120 IDPTTHKPLS NVEVKEENKC TDTVALQIPQ SKGLSSTVSS FAAHEPTFLV SDSSYYGNGL 180 TEASREQFIN KQVYDPLSYI DLQAGTGPSG YNSNLMPQFH PSVRPFDQKH FETNSSFTFT 240 SMPSLTNFDH GNKSGTDYFS DNSASRISTS FLLNEAKESS SNSSNISSYT GFQMNNMVEN 300 GVFSWDTEYK LDSMFQFQVN GIKSEELKPS SWQEGHLHNH NSVDFSTYPL TSLSEDLTAE 360 NFDVFQQI

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MRRHSCCLKQ KLRKGLWSPE EDEKLFNYIT RFGVGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGMF SQQEEDLIIS LHEVLGNRWA QIAAQLPGRT DNEIKNFWNS CLKKKLMKQG  120
IDPTTHKPLS NVEVKEENKC TDTVALQIPQ SKGLSSTVSS FAAHEPTFLV SDSSYYGNGL  180
TEASREQFIN KQVYDPLSYI DLQAGTGPSG YNSNLMPQFH PSVRPFDQKH FETNSSFTFT  240
SMPSLTNFDH GNKSGTDYFS DNSASRISTS FLLNEAKESS SNSSNISSYT GFQMNNMVEN  300
GVFSWDTEYK LDSMFQFQVN GIKSEELKPS SWQEGHLHNH NSVDFSTYPL TSLSEDLTAE  360
NFDVFQQI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26660.1	5e-84	MYB family protein