PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022737265.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 213aa MW: 23962.2 Da PI: 8.2786

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022737265.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51	3.2e-16	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++ Ed++l+d+++++G g+W++ ++ g+ R++k+c++rw +yl XP_022737265.1 13 KGAWSKLEDQKLIDYIQKHGEGCWRSLPQAAGLLRCGKSCRLRWVNYL 60 79****************************99**********97 PP
2	Myb_DNA-binding	52.1	1.5e-16	66	110	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++ ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++ XP_022737265.1 66 RGNFAEDEEDLIIKLHALLGNR-WSLIAGRLP-GRTDNEVKNYWNTH 110 8999****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 213 aa Download sequence
MRKPCCEKKE TNKGAWSKLE DQKLIDYIQK HGEGCWRSLP QAAGLLRCGK SCRLRWVNYL 60 RPELKRGNFA EDEEDLIIKL HALLGNRWSL IAGRLPGRTD NEVKNYWNTH VKRKLLQMGI 120 DPNNRRLVLS SVITKTNMSN ESNSGAVDSV SYNNNQHLNS ACGSEAEESN TVISSLPDLN 180 LDLTIAPPVI EERQIIGSSQ VECAVYNPTS VLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22640.1	1e-80	MYB family protein