PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022737275.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 165aa    MW: 18800.9 Da    PI: 10.1494
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022737275.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF40.53.6e-132660438
                    -SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEE CS
          SRF-TF  4 enksnrqvtfskRrngilKKAeELSvLCdaevavi 38
                    + k n +vtf+k rng++KKA+E+ +LC+a++ +i
  XP_022737275.1 26 KRKNNLHVTFTKCRNGLFKKASEIRILCGAKIDII 60
                    668899**************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MNSKCCENKK PGKTKGRQRT EFKQLKRKNN LHVTFTKCRN GLFKKASEIR ILCGAKIDII  60
LKELEKEKKR EKVTEEAKKA GNNGGLWWDI EAIDGMGVEG LEAYMKAMEN LKNNLMMRAN  120
GLTMANVMDT AAHADDHGYG FGFAHDQRFW GHIVKNIISM LDIVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.11e-12M-type_MADS family protein