PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022737278.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 185aa    MW: 20022.6 Da    PI: 7.2077
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022737278.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260138.62.1e-4310108199
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrrkC ++C++apyfp e+p+kf nvhk+FGasnv+kll++l +++reda++sl++eAear+rdPvyG+vg i+ lq+q++ l++el+
  XP_022737278.1  10 PCAACKLLRRKCMPGCIFAPYFPPEEPQKFVNVHKIFGASNVTKLLNELLPHQREDAVNSLAFEAEARVRDPVYGCVGAISFLQRQVQGLQKELD 104
                     7*********************************************************************************************9 PP

          DUF260  96 llke 99 
                     ++++
  XP_022737278.1 105 AANA 108
                     9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MASSSSYNSP CAACKLLRRK CMPGCIFAPY FPPEEPQKFV NVHKIFGASN VTKLLNELLP  60
HQREDAVNSL AFEAEARVRD PVYGCVGAIS FLQRQVQGLQ KELDAANADL IRYACNEIPT  120
GLPAAPGTSS VQPLTPRNRP AEFNRRIGNE GGGFYQPPGA FPLPYSFPWN DNSSGGMNDG  180
GEGGM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63090.25e-73LBD family protein