PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022737294.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 111aa    MW: 13121 Da    PI: 9.8512
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022737294.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF97.84.5e-31958150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    +rienk+nrqvtfskRrng+lKKA+ELSvLCdaeva+iifss+gk+ e+ 
  XP_022737294.1  9 ERIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKVSEFG 58
                    69**********************************************95 PP
2K-box18.77.3e-0876109538
           K-box   5 sgksleeakaeslqqelakLkkeienLqreqRhl 38 
                     s+++  e ++++l+qe+ +Lk+e+e+L+r+qR++
  XP_022737294.1  76 SQVKIPEDETQTLYQEILRLKAEYESLERSQRQF 109
                     445578899***********************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 111 aa     Download sequence    
MGRGKVVLER IENKINRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSS RGKVSEFGSN  60
TVTQTLEKYW QHRYNSQVKI PEDETQTLYQ EILRLKAEYE SLERSQRQFY I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45650.15e-43MIKC_MADS family protein