PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022737321.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 379aa MW: 41871.6 Da PI: 6.351

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022737321.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.7	4.7e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd + + +v ++G+g+W++++++ g++R++k+c++rw +yl XP_022737321.1 14 KGLWSEEEDAKMLAYVSKHGTGNWTAVPKKAGLRRCGKSCRLRWTNYL 61 678*******************************************97 PP
2	Myb_DNA-binding	47.6	3.9e-15	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T++E+el++++++ G++ W+ Ia+ ++ gRt++++k++w++ XP_022737321.1 67 RESFTPQEEELIIRLHAAIGSR-WSIIAQQLP-GRTDNDVKNYWNT 110 679*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MVRPPCCDKL NVKKGLWSEE EDAKMLAYVS KHGTGNWTAV PKKAGLRRCG KSCRLRWTNY 60 LRPDLKRESF TPQEEELIIR LHAAIGSRWS IIAQQLPGRT DNDVKNYWNT KLRKKLSEMG 120 IDPVTHKPFS QILADYGNIG GLPKSRARIG SLNRDMKNAF LTRPEPFPPP ATAAEGFSNI 180 NNRLMTTIAS PGMEPIQDNF FPNNSINHHP DSDSLELLSQ LQAIKVVTEA TNYTGHQTIS 240 PQFPNKYSLS LSSPSSSSTS STCSTAAQEK SGLAFSWRDF LLEDAFLPTD HTQGQEDRIL 300 EFSSDEIVPQ SHSSNGTSAE NIDNNNSDNN GVQGISGGGV PSHGFHASSS TNSSFVAAMI 360 DQENEMFSEF ANLLEDPCY

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MVRPPCCDKL NVKKGLWSEE EDAKMLAYVS KHGTGNWTAV PKKAGLRRCG KSCRLRWTNY  60
LRPDLKRESF TPQEEELIIR LHAAIGSRWS IIAQQLPGRT DNDVKNYWNT KLRKKLSEMG  120
IDPVTHKPFS QILADYGNIG GLPKSRARIG SLNRDMKNAF LTRPEPFPPP ATAAEGFSNI  180
NNRLMTTIAS PGMEPIQDNF FPNNSINHHP DSDSLELLSQ LQAIKVVTEA TNYTGHQTIS  240
PQFPNKYSLS LSSPSSSSTS STCSTAAQEK SGLAFSWRDF LLEDAFLPTD HTQGQEDRIL  300
EFSSDEIVPQ SHSSNGTSAE NIDNNNSDNN GVQGISGGGV PSHGFHASSS TNSSFVAAMI  360
DQENEMFSEF ANLLEDPCY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G28470.1	2e-75	MYB family protein