PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022737332.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 395aa MW: 43207.2 Da PI: 8.9786

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022737332.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.5	3.7e-16	228	273	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ +L++l+P+a K +Ka++L +++eY+k+Lq XP_022737332.1 228 HNLSERRRRDRINQKMKTLQKLVPNA-----SKTDKASMLDEVIEYLKQLQ 273 9**********************9.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
LPSCSSSLKY LLVFCFGAHF FDHGTALIQA FLYLKFRSNY ELAGLTWENG QLVMHGLSGL 60 LPTAPTKPTW GRSSDTLESI VHQATCHNQK QNFDLLRLGQ TPTNRSSIAA SSGGNWAESP 120 GRLPVATAAL LKKRARSDSD QCRKNLGGGI QEDRADRSPC ASATFCRDND TAMMTWASHE 180 TPQSMKTETT DKDSACHDGS ENRGEDMETR RETGRSHSTR RSQAAAIHNL SERRRRDRIN 240 QKMKTLQKLV PNASKTDKAS MLDEVIEYLK QLQAQVQMMS MRSMPQMMMP LGMQQHLQTS 300 LLARMGMGVG LGMGMGMLDI NSMARNASQS LPPLMHPSPV TAPTPTFLPP TFVAAPTIPT 360 HAAAQLNSNA GSNASVPLPD PYCAFLAQVC LSNSH

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

LPSCSSSLKY LLVFCFGAHF FDHGTALIQA FLYLKFRSNY ELAGLTWENG QLVMHGLSGL  60
LPTAPTKPTW GRSSDTLESI VHQATCHNQK QNFDLLRLGQ TPTNRSSIAA SSGGNWAESP  120
GRLPVATAAL LKKRARSDSD QCRKNLGGGI QEDRADRSPC ASATFCRDND TAMMTWASHE  180
TPQSMKTETT DKDSACHDGS ENRGEDMETR RETGRSHSTR RSQAAAIHNL SERRRRDRIN  240
QKMKTLQKLV PNASKTDKAS MLDEVIEYLK QLQAQVQMMS MRSMPQMMMP LGMQQHLQTS  300
LLARMGMGVG LGMGMGMLDI NSMARNASQS LPPLMHPSPV TAPTPTFLPP TFVAAPTIPT  360
HAAAQLNSNA GSNASVPLPD PYCAFLAQVC LSNSH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	131	137	LKKRARS
2	232	237	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	6e-39	bHLH family protein