PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022737336.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 170aa    MW: 19424 Da    PI: 8.1879
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022737336.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF95.81.8e-30959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krienk+nrqvtf+kRrng+lKK +ELSvLCdaeva+i+fs++gklye++s
  XP_022737336.1  9 KRIENKINRQVTFAKRRNGLLKKGYELSVLCDAEVALIVFSNRGKLYEFCS 59
                    79***********************************************96 PP
2K-box30.91.1e-1187128950
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslke 50 
                     ++ a  +s++qe+ kLk+++e Lqr+qR+llGedLe+ +l+ 
  XP_022737336.1  87 TQVALKQSSYQEYLKLKARVEVLQRSQRNLLGEDLEDSKLNS 128
                     55666799***************************9876654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MGRGRDELKR IENKINRQVT FAKRRNGLLK KGYELSVLCD AEVALIVFSN RGKLYEFCSS  60
SSMMKTLEKY QRCSYGTLDT SRSISETQVA LKQSSYQEYL KLKARVEVLQ RSQRNLLGED  120
LEDSKLNSEK ELDCHNLEVE KPQSDKSKVL CEESNHSQNE VVAASLYGEG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24260.35e-61MIKC_MADS family protein