PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022737347.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 381aa MW: 42845.4 Da PI: 6.1082

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022737347.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	62.4	9.1e-20	55	102	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lvd+++++G g+W++ ++ g++R++k+c++rw +yl XP_022737347.1 55 KGPWTPEEDQKLVDYINKHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 102 79********************************************97 PP
2	Myb_DNA-binding	51.8	1.9e-16	108	151	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T+eE+ +++++ lG++ W++Ia +++ gRt++++k++w++ XP_022737347.1 108 RGKFTEEEERVIINLHSVLGNK-WSRIATHLP-GRTDNEIKNFWNT 151 89******************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MSSPQNIQIK LLLLYQQSPF LSQFDIRFFP WLIISFVSAA MGRSPCCAED ANLKKGPWTP 60 EEDQKLVDYI NKHGHGSWRA LPKLAGLNRC GKSCRLRWTN YLRPDIKRGK FTEEEERVII 120 NLHSVLGNKW SRIATHLPGR TDNEIKNFWN TRVRKKLLNM GIDPHTHKPR TDLDHLLNLS 180 QLLCAAQLGN LMNPWDTAFK LQADAAQLAK AQLLQNLMQI LNSNKLANVE SASGLLGSQN 240 LYPFEGLLNG TSTLSAKELT PSPTPQNLPN NPGAIPQTSS DHQAVENPWP YFQGGFNYES 300 LDMNNQSLSN SLEQTENPLP ELVSGSPDTS PINQMENKTD TAPDSTIYEA WEKLIIEDEA 360 DGSYWKEILD FTSSSSSPIS W

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MSSPQNIQIK LLLLYQQSPF LSQFDIRFFP WLIISFVSAA MGRSPCCAED ANLKKGPWTP  60
EEDQKLVDYI NKHGHGSWRA LPKLAGLNRC GKSCRLRWTN YLRPDIKRGK FTEEEERVII  120
NLHSVLGNKW SRIATHLPGR TDNEIKNFWN TRVRKKLLNM GIDPHTHKPR TDLDHLLNLS  180
QLLCAAQLGN LMNPWDTAFK LQADAAQLAK AQLLQNLMQI LNSNKLANVE SASGLLGSQN  240
LYPFEGLLNG TSTLSAKELT PSPTPQNLPN NPGAIPQTSS DHQAVENPWP YFQGGFNYES  300
LDMNNQSLSN SLEQTENPLP ELVSGSPDTS PINQMENKTD TAPDSTIYEA WEKLIIEDEA  360
DGSYWKEILD FTSSSSSPIS W

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17785.1	4e-81	MYB family protein