PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022737459.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 244aa    MW: 28492.3 Da    PI: 8.7948
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022737459.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF94.54.7e-30959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krienk+nrqvtfskRr g+lKKA+E+SvLCdaeva+++fs++gkl eys+
  XP_022737459.1  9 KRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALLVFSNKGKLSEYST 59
                    79***********************************************96 PP
2K-box1041.9e-34781744100
           K-box   4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                     ++  + e +++ +++ e+akLk ++e Lq++qRh++GedLe+Lsl+eLq+LeqqL+++lk+iRs+Kn+l++e+i+elqkk k+lqe+n+ L kk+
  XP_022737459.1  78 RQLAAEEIEQNGNWTLEHAKLKVRMEVLQKNQRHFMGEDLENLSLRELQNLEQQLDSALKHIRSRKNQLMFESISELQKKDKALQEQNNILAKKV 172
                     555666778899**********************************************************************************9 PP

           K-box  99 ee 100
                     +e
  XP_022737459.1 173 KE 174
                     86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MGRGRVQLKR IENKINRQVT FSKRRSGLLK KAHEISVLCD AEVALLVFSN KGKLSEYSTD  60
SCMERILERY ERYSYTERQL AAEEIEQNGN WTLEHAKLKV RMEVLQKNQR HFMGEDLENL  120
SLRELQNLEQ QLDSALKHIR SRKNQLMFES ISELQKKDKA LQEQNNILAK KVKEKEKTLV  180
QQAQWEQQNN CQDPSSMLLP QPIQSLNISG TYETRSSGRE EEGDPAQHHA TNALLPPWLI  240
RHLE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60910.11e-106MIKC_MADS family protein