PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022737473.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 224aa    MW: 24622.3 Da    PI: 8.9309
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022737473.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26090.32.4e-284107199
          DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                     +C++C+vlr+ C+++C+++p++     +++q++++ +++k++G++ +++l++a +++ r+++++sl+yeA+ r+ dP++G++g++ + +++l+q+
  XP_022737473.1   4 SCNGCRVLRKCCNENCTIRPCLqwiptAQSQSNATLFLAKFYGRAGLINLINAGSQKLRSEIFKSLLYEACGRIVDPIHGSIGLMYSKKWHLCQA 98 
                     6*********************9997666779*************************************************************** PP

          DUF260  91 kaelallke 99 
                     +++++l ++
  XP_022737473.1  99 AVDAVLSGA 107
                     *99988765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MGTSCNGCRV LRKCCNENCT IRPCLQWIPT AQSQSNATLF LAKFYGRAGL INLINAGSQK  60
LRSEIFKSLL YEACGRIVDP IHGSIGLMYS KKWHLCQAAV DAVLSGAPIN QVSSQISALN  120
CSPAKYACDI RHVSKDKNTD DGLRKVKPRG RFKRSASKPK PKVEKDVYES ACIRGLSLRV  180
DSGEGDVVSV ETVEASLGDD SDLELELTLG FEPKPKKREQ CQRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68510.11e-61LBD family protein