PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022737493.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 313aa    MW: 35711.1 Da    PI: 8.1199
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022737493.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.71.2e-172168148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd +l+++++++G g W++ a++ g++Rt+k+c++rw++yl
   XP_022737493.1 21 RGPWTLEEDSILIHYIALHGEGLWNLLAKRAGLKRTGKSCRLRWLNYL 68
                     89********************************************97 PP
2Myb_DNA-binding48.42.2e-1574117146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T +E+ l+++++ ++G++ W++Ia++++ gRt++++k++w++
   XP_022737493.1  74 RGNLTLQEQFLILELHSKWGNR-WSKIAQHLP-GRTDNEIKNYWRT 117
                      7899******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MSSSRKSSTN SSEDDAKQLR RGPWTLEEDS ILIHYIALHG EGLWNLLAKR AGLKRTGKSC  60
RLRWLNYLKP DIKRGNLTLQ EQFLILELHS KWGNRWSKIA QHLPGRTDNE IKNYWRTRVQ  120
KQARYLKIDA NSTAFRNVIR CLWMPRLLQK MEGSSTSSSI MTSENSPVLR SLDLTSQHQA  180
LMTVQKVPGQ GPGNLSEAVQ CLDQKEQNSD SCVSSSESMN NISKISQFAE YQTSPFRMFD  240
NNDYNMLAMD SYYVDNFNNS SCYNMEIINQ ASTSALGDFA KPVGDCHMAE NNWVNDGFAD  300
GLWSVGELWE LRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68320.19e-76MYB family protein