PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022737613.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 369aa MW: 42240.4 Da PI: 7.1911

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022737613.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52	1.6e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++++++G g+W+++++ g+ R++k+c++rw +yl XP_022737613.1 14 KGLWSPEEDEKLFNYITRFGVGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	46.5	8.3e-15	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E++l++++++ lG++ W+ Ia+ ++ gRt++++k++w++ XP_022737613.1 67 RGMFSQQEEDLIIRLHEFLGNR-WAQIAAQLP-GRTDNEIKNFWNS 110 788*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MGRHSCCLKQ KLRKGLWSPE EDEKLFNYIT RFGVGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGMF SQQEEDLIIR LHEFLGNRWA QIAAQLPGRT DNEIKNFWNS CLKKKLMKQG 120 IDPTTHKPLS KVEVKEENKC TDKVVLQTPQ SKGLSSTVSS FAAHGPTFLV SDSSNYYGSG 180 LTEASRELFI NKQVYDPLTY IDLQAEIDHP SEYNSNFVPQ FHPSVRSFDQ NRFEINSSFT 240 FTSMPSLTNF DQGNMSRTDF SDISASRIST SFLLNEAKES SSNSSNISSY TEFQMNKMVE 300 NRAFSWDTGS TLDSMFQFQV NGIKPEELKP SSWQEEQLHN HNSVNISSYP LTLLSEDLTR 360 ANFDVFQQI

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MGRHSCCLKQ KLRKGLWSPE EDEKLFNYIT RFGVGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGMF SQQEEDLIIR LHEFLGNRWA QIAAQLPGRT DNEIKNFWNS CLKKKLMKQG  120
IDPTTHKPLS KVEVKEENKC TDKVVLQTPQ SKGLSSTVSS FAAHGPTFLV SDSSNYYGSG  180
LTEASRELFI NKQVYDPLTY IDLQAEIDHP SEYNSNFVPQ FHPSVRSFDQ NRFEINSSFT  240
FTSMPSLTNF DQGNMSRTDF SDISASRIST SFLLNEAKES SSNSSNISSY TEFQMNKMVE  300
NRAFSWDTGS TLDSMFQFQV NGIKPEELKP SSWQEEQLHN HNSVNISSYP LTLLSEDLTR  360
ANFDVFQQI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26660.1	9e-85	MYB family protein