PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022737615.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 221aa MW: 25430.2 Da PI: 9.4272

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022737615.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.2	7.1e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++++++G g+W+++++ g+ R++k+c++rw +yl XP_022737615.1 14 KGLWSPEEDEKLFNYITRFGVGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	47.6	3.8e-15	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg ++++E++l++++++ lG++ W+ Ia+ ++ gRt++++k++w++ XP_022737615.1 67 RGMFSQQEEDLIIRLHEFLGNR-WAQIAAQLP-GRTDNEIKNFWNSC 111 788*****************.*****.*********975 PP

Sequence ? help Back to Top
Protein Sequence Length: 221 aa Download sequence
MGRHSCCLKQ KLRKGLWSPE EDEKLFNYIT RFGVGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGMF SQQEEDLIIR LHEFLGNRWA QIAAQLPGRT DNEIKNFWNS CLKKKLMKQG 120 IDPTTHKPLS KVEVKEENKC TDKVVLQTPQ SKGLSSTVSS FAAHGPTFLV SDSSNYYGSG 180 LTEASRELFI NKQVYDPLTY IDLQAEIDHP KQTFLIFQLR E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26660.1	1e-85	MYB family protein