PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022737694.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SBP

Protein Properties

Length: 560aa MW: 60871.5 Da PI: 7.599

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022737694.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.3	1.6e-41	176	251	2	77
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 Cqv gC++dl++ k+yh+rh+vC+vhsk+++v+v+g+eqrfCqqCsrfh l efD++krsCr+rLa+hnerrrk+q XP_022737694.1 176 CQVYGCNKDLTSSKDYHKRHRVCDVHSKSAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQ 251 **************************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 560 aa Download sequence
MESWSYVSGE KGSASDAAIS PSDSYARNRC AFMNWELKGP YSFGSNMPVS GQQTIENHAF 60 EELGYGELIG KQLPNDSIGD VLSSKVSRAR TVNPIMAALN AFSGDNESTS KLSSSVVDSN 120 SRDSSLIDLK LGRFPDYRDG QNFSFSIGPP ILSSSESSTP PRRVRAAGVH SHTAYCQVYG 180 CNKDLTSSKD YHKRHRVCDV HSKSAKVIVN GIEQRFCQQC SRFHLLAEFD DGKRSCRKRL 240 AGHNERRRKP QVGVRSGRTG TLLEQYNGFA GGRFHGTMLT TSSFICQDIL PSGLLHPEKY 300 VTNEWGKRIK VEDGTDYSPL SAISIANGHF RLKFPHPPSG IEKVFPSFHD HGANTVTGGI 360 LGENNAQYPH DFGGSNSGSR PLFQDTSLGS EDINVFNAAS TIQGLSGISD SGCAPSLLSS 420 QPQNSSSHSS GIPMARSLVI PGNHTHYNMS QVSEKLIGVS SQASTTGVSN KFSSSGINST 480 EGSHLGALLI SDGNEAANFD ITDRIYQGSQ FMNAKDRLSC EDGPTIDLLQ LSSQLQRVEH 540 QRQSMQVKQE NEAFCCLRIT

Sequence ? help Back to Top

Protein Sequence Length: 560 aa Download sequence

MESWSYVSGE KGSASDAAIS PSDSYARNRC AFMNWELKGP YSFGSNMPVS GQQTIENHAF  60
EELGYGELIG KQLPNDSIGD VLSSKVSRAR TVNPIMAALN AFSGDNESTS KLSSSVVDSN  120
SRDSSLIDLK LGRFPDYRDG QNFSFSIGPP ILSSSESSTP PRRVRAAGVH SHTAYCQVYG  180
CNKDLTSSKD YHKRHRVCDV HSKSAKVIVN GIEQRFCQQC SRFHLLAEFD DGKRSCRKRL  240
AGHNERRRKP QVGVRSGRTG TLLEQYNGFA GGRFHGTMLT TSSFICQDIL PSGLLHPEKY  300
VTNEWGKRIK VEDGTDYSPL SAISIANGHF RLKFPHPPSG IEKVFPSFHD HGANTVTGGI  360
LGENNAQYPH DFGGSNSGSR PLFQDTSLGS EDINVFNAAS TIQGLSGISD SGCAPSLLSS  420
QPQNSSSHSS GIPMARSLVI PGNHTHYNMS QVSEKLIGVS SQASTTGVSN KFSSSGINST  480
EGSHLGALLI SDGNEAANFD ITDRIYQGSQ FMNAKDRLSC EDGPTIDLLQ LSSQLQRVEH  540
QRQSMQVKQE NEAFCCLRIT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	2e-49	SBP family protein