PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022737915.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 497aa MW: 56238.6 Da PI: 8.3845

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022737915.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.1	2e-18	54	100	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd ll +avk+ ++Wk+Ia+ ++ gRt+ qc +rwqk+l XP_022737915.1 54 KGGWTEEEDNLLTEAVKKCNARNWKKIAEFLP-GRTDIQCLHRWQKVL 100 688***************************.**********986 PP
2	Myb_DNA-binding	57.8	2.6e-18	106	152	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ + +vk++G ++W+ Ia+++g gR +kqc++rw+++l XP_022737915.1 106 KGPWTKEEDDHITMLVKKYGCKRWSVIAKYLG-GRIGKQCRERWYNHL 152 79****************************.***********97 PP
3	Myb_DNA-binding	50.1	6.3e-16	158	200	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+ E+ +l +++ +G++ W++Ia+ ++ gRt++ +k++w+ XP_022737915.1 158 KDSWTEKEEAILTYYHQIYGNK-WTKIAKLLP-GRTDNAIKNHWN 200 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 497 aa Download sequence
MVEVKKEKEE YHECLAEEVR SASPSSCFDS SFDTTTRSAS LQGRVTGPSR HSRKGGWTEE 60 EDNLLTEAVK KCNARNWKKI AEFLPGRTDI QCLHRWQKVL NPGILKGPWT KEEDDHITML 120 VKKYGCKRWS VIAKYLGGRI GKQCRERWYN HLDPTIRKDS WTEKEEAILT YYHQIYGNKW 180 TKIAKLLPGR TDNAIKNHWN CTLKKKLSLY STHLYAMDIC IEESGFSDQE ITSKFMKVKE 240 WRQVLYEAKS VNQNIAVDCG AGTCKIDLVL GIANQAEIKL EADCGKVGKH RSPGVPNEQV 300 TPLNNRVHFD DKANVTIDDS IVGSVRRYAK HIKTHEPRLA SCRVGSQDSH ALLSSTSVDS 360 PSSPLTFKIS EDGQVHMQSE NQRMNTVYSS DCLSHNEPSQ LKDSVSAIFP IVDSQDVSLK 420 SSFCYSTPPK LVESLSPSSS SPESILRISA MTFKNTPSII RKRSYKKAWN DNFSDASCSP 480 VRSFSCFHCE GEINDTY

Sequence ? help Back to Top

Protein Sequence Length: 497 aa Download sequence

MVEVKKEKEE YHECLAEEVR SASPSSCFDS SFDTTTRSAS LQGRVTGPSR HSRKGGWTEE  60
EDNLLTEAVK KCNARNWKKI AEFLPGRTDI QCLHRWQKVL NPGILKGPWT KEEDDHITML  120
VKKYGCKRWS VIAKYLGGRI GKQCRERWYN HLDPTIRKDS WTEKEEAILT YYHQIYGNKW  180
TKIAKLLPGR TDNAIKNHWN CTLKKKLSLY STHLYAMDIC IEESGFSDQE ITSKFMKVKE  240
WRQVLYEAKS VNQNIAVDCG AGTCKIDLVL GIANQAEIKL EADCGKVGKH RSPGVPNEQV  300
TPLNNRVHFD DKANVTIDDS IVGSVRRYAK HIKTHEPRLA SCRVGSQDSH ALLSSTSVDS  360
PSSPLTFKIS EDGQVHMQSE NQRMNTVYSS DCLSHNEPSQ LKDSVSAIFP IVDSQDVSLK  420
SSFCYSTPPK LVESLSPSSS SPESILRISA MTFKNTPSII RKRSYKKAWN DNFSDASCSP  480
VRSFSCFHCE GEINDTY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	3e-79	MYB family protein