PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022737916.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 466aa MW: 52653.5 Da PI: 8.349

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022737916.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.3	1.8e-18	60	106	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd ll +avk+ ++Wk+Ia+ ++ gRt+ qc +rwqk+l XP_022737916.1 60 KGGWTEEEDNLLTEAVKKCNARNWKKIAEFLP-GRTDIQCLHRWQKVL 106 688***************************.**********986 PP
2	Myb_DNA-binding	57.9	2.4e-18	112	158	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ + +vk++G ++W+ Ia+++g gR +kqc++rw+++l XP_022737916.1 112 KGPWTKEEDDHITMLVKKYGCKRWSVIAKYLG-GRIGKQCRERWYNHL 158 79****************************.***********97 PP
3	Myb_DNA-binding	30.1	1.1e-09	164	207	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +++WT+ E+ +l +++ +G++ W++Ia+ ++ g ++ ++ s++ k+ XP_022737916.1 164 KDSWTEKEEAILTYYHQIYGNK-WTKIAKLLP-G-SDQEITSKFMKV 207 679*****************.*******.7.999999999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MVEVKKEKEE YHECLAEEVR SASPSSCFDS SFDTTTRSAS LQGLYCCCRR VTGPSRHSRK 60 GGWTEEEDNL LTEAVKKCNA RNWKKIAEFL PGRTDIQCLH RWQKVLNPGI LKGPWTKEED 120 DHITMLVKKY GCKRWSVIAK YLGGRIGKQC RERWYNHLDP TIRKDSWTEK EEAILTYYHQ 180 IYGNKWTKIA KLLPGSDQEI TSKFMKVKEW RQVLYEAKSV NQNIAVDCGA GTCKIDLVLG 240 IANQAEIKLE ADCGKVGKHR SPGVPNEQVT PLNNRVHFDD KANVTIDDSI VGSVRRYAKH 300 IKTHEPRLAS CRVGSQDSHA LLSSTSVDSP SSPLTFKISE DGQVHMQSEN QRMNTVYSSD 360 CLSHNEPSQL KDSVSAIFPI VDSQDVSLKS SFCYSTPPKL VESLSPSSSS PESILRISAM 420 TFKNTPSIIR KRSYKKAWND NFSDASCSPV RSFSCFHCEG EINDTY

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MVEVKKEKEE YHECLAEEVR SASPSSCFDS SFDTTTRSAS LQGLYCCCRR VTGPSRHSRK  60
GGWTEEEDNL LTEAVKKCNA RNWKKIAEFL PGRTDIQCLH RWQKVLNPGI LKGPWTKEED  120
DHITMLVKKY GCKRWSVIAK YLGGRIGKQC RERWYNHLDP TIRKDSWTEK EEAILTYYHQ  180
IYGNKWTKIA KLLPGSDQEI TSKFMKVKEW RQVLYEAKSV NQNIAVDCGA GTCKIDLVLG  240
IANQAEIKLE ADCGKVGKHR SPGVPNEQVT PLNNRVHFDD KANVTIDDSI VGSVRRYAKH  300
IKTHEPRLAS CRVGSQDSHA LLSSTSVDSP SSPLTFKISE DGQVHMQSEN QRMNTVYSSD  360
CLSHNEPSQL KDSVSAIFPI VDSQDVSLKS SFCYSTPPKL VESLSPSSSS PESILRISAM  420
TFKNTPSIIR KRSYKKAWND NFSDASCSPV RSFSCFHCEG EINDTY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	3e-66	MYB family protein