PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022737917.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 428aa MW: 48808.4 Da PI: 8.392

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022737917.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.4	1.6e-18	60	106	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd ll +avk+ ++Wk+Ia+ ++ gRt+ qc +rwqk+l XP_022737917.1 60 KGGWTEEEDNLLTEAVKKCNARNWKKIAEFLP-GRTDIQCLHRWQKVL 106 688***************************.**********986 PP
2	Myb_DNA-binding	58	2.1e-18	112	158	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ + +vk++G ++W+ Ia+++g gR +kqc++rw+++l XP_022737917.1 112 KGPWTKEEDDHITMLVKKYGCKRWSVIAKYLG-GRIGKQCRERWYNHL 158 79****************************.***********97 PP
3	Myb_DNA-binding	50.4	5.1e-16	164	206	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+ E+ +l +++ +G++ W++Ia+ ++ gRt++ +k++w+ XP_022737917.1 164 KDSWTEKEEAILTYYHQIYGNK-WTKIAKLLP-GRTDNAIKNHWN 206 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MVEVKKEKEE YHECLAEEVR SASPSSCFDS SFDTTTRSAS LQGLYCCCRR VTGPSRHSRK 60 GGWTEEEDNL LTEAVKKCNA RNWKKIAEFL PGRTDIQCLH RWQKVLNPGI LKGPWTKEED 120 DHITMLVKKY GCKRWSVIAK YLGGRIGKQC RERWYNHLDP TIRKDSWTEK EEAILTYYHQ 180 IYGNKWTKIA KLLPGRTDNA IKNHWNCTLK KKLSLYSTHL YAMDICIEES GFSDQEITSK 240 FMKVKEWRQV LYEAKSVNQN IAVDCGAGTC KIDLVLGIAN QAEIKLEADC GKVGKHRSPG 300 VPNEQVHMQS ENQRMNTVYS SDCLSHNEPS QLKDSVSAIF PIVDSQDVSL KSSFCYSTPP 360 KLVESLSPSS SSPESILRIS AMTFKNTPSI IRKRSYKKAW NDNFSDASCS PVRSFSCFHC 420 EGEINDTY

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MVEVKKEKEE YHECLAEEVR SASPSSCFDS SFDTTTRSAS LQGLYCCCRR VTGPSRHSRK  60
GGWTEEEDNL LTEAVKKCNA RNWKKIAEFL PGRTDIQCLH RWQKVLNPGI LKGPWTKEED  120
DHITMLVKKY GCKRWSVIAK YLGGRIGKQC RERWYNHLDP TIRKDSWTEK EEAILTYYHQ  180
IYGNKWTKIA KLLPGRTDNA IKNHWNCTLK KKLSLYSTHL YAMDICIEES GFSDQEITSK  240
FMKVKEWRQV LYEAKSVNQN IAVDCGAGTC KIDLVLGIAN QAEIKLEADC GKVGKHRSPG  300
VPNEQVHMQS ENQRMNTVYS SDCLSHNEPS QLKDSVSAIF PIVDSQDVSL KSSFCYSTPP  360
KLVESLSPSS SSPESILRIS AMTFKNTPSI IRKRSYKKAW NDNFSDASCS PVRSFSCFHC  420
EGEINDTY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	1e-80	MYB family protein