PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022738037.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 475aa MW: 53431.2 Da PI: 7.8396

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022738037.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.9	3.8e-13	301	346	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+r+N++f Lr+++P+ K++Ka+ L +v YIk+L XP_022738037.1 301 NHVEAERQRRERLNHRFYALRSVVPNV-----SKMDKASLLSDTVAYIKEL 346 799*********************6.....5**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MSSSSSFSLI TFGQNASPTL QQRLQFIIVQ SRPKWWVYSI FWQASRDAHG QLVLSWGDGY 60 FRGTRDFTGK SSNKLSQPKF VSNFERKRSG KEVQALFSEE MDMDRMVDGD VTDYEWFYTV 120 SITRSFAIGD GILGKAFGSG SYIWLSGDQE LQLYDCERVR EARMRGIQTL VCLSTSFGVV 180 ELGSSEMIKE DWAMVQLAKS IFGSDINSLG SKQPGQESQV QISTQSVPFL DFGMVSGDQK 240 EWILEEKQQG ETKKDTTGLG RWSSDSGADS DGNFASADTE CNAWLKKRGR KPGSGKESPL 300 NHVEAERQRR ERLNHRFYAL RSVVPNVSKM DKASLLSDTV AYIKELKSKI DELQTKLQAQ 360 SQRSKSYAIN VFDNQISTTS SFDNTRPFSN YGPKTMAVCV KIIGSDAMIR VQCPDVNYPA 420 ARLMDALRDL ELHIHHASVS HVNELVLQDV VVRVPTGFIS EEVLRTAILQ RCRLN

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MSSSSSFSLI TFGQNASPTL QQRLQFIIVQ SRPKWWVYSI FWQASRDAHG QLVLSWGDGY  60
FRGTRDFTGK SSNKLSQPKF VSNFERKRSG KEVQALFSEE MDMDRMVDGD VTDYEWFYTV  120
SITRSFAIGD GILGKAFGSG SYIWLSGDQE LQLYDCERVR EARMRGIQTL VCLSTSFGVV  180
ELGSSEMIKE DWAMVQLAKS IFGSDINSLG SKQPGQESQV QISTQSVPFL DFGMVSGDQK  240
EWILEEKQQG ETKKDTTGLG RWSSDSGADS DGNFASADTE CNAWLKKRGR KPGSGKESPL  300
NHVEAERQRR ERLNHRFYAL RSVVPNVSKM DKASLLSDTV AYIKELKSKI DELQTKLQAQ  360
SQRSKSYAIN VFDNQISTTS SFDNTRPFSN YGPKTMAVCV KIIGSDAMIR VQCPDVNYPA  420
ARLMDALRDL ELHIHHASVS HVNELVLQDV VVRVPTGFIS EEVLRTAILQ RCRLN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	307	312	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	7e-65	bHLH family protein