PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022738066.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 284aa    MW: 32149.9 Da    PI: 7.6615
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022738066.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.21.4e-161562148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEd++l ++v+++G g+W++++   g+ R +k+c++rw +yl
   XP_022738066.1 15 KGLWSPEEDLKLRNYVNKHGHGCWSSVPINAGLQRNGKSCRLRWINYL 62
                     678*******************************************97 PP
2Myb_DNA-binding53.74.7e-1768113148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg +T++E+e ++ ++++lG++ W+ Ia+ ++ gRt++++k++w++yl
   XP_022738066.1  68 RGMFTPQEEETILTLHHLLGNK-WSQIAQNLP-GRTDNEIKNYWHSYL 113
                      789*******************.*********.************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MGCKSSDKPK AKHRKGLWSP EEDLKLRNYV NKHGHGCWSS VPINAGLQRN GKSCRLRWIN  60
YLRPGLKRGM FTPQEEETIL TLHHLLGNKW SQIAQNLPGR TDNEIKNYWH SYLKKRFAKV  120
EELEAQTRTQ YTTSSSENTE SILSPQNLTD RMPSFESIRH IEKSSINTDQ AQRSPLPKLL  180
FAEWLSLDHE GGSFPNSGKP VASSDGFNHG SSSNFQDPFM NAYLLNEGVF GSYLHDGLSN  240
ASVNEMFSSQ FKFETQISGN EFVGSISGND ICSDFSMNND VMYI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52260.17e-57MYB family protein