PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022738072.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

NF-X1

Protein Properties

Length: 1082aa MW: 117581 Da PI: 7.9845

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022738072.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	19.7	1.8e-06	275	293	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG+H C+++CH GpC+pC+ XP_022738072.1 275 CGRHLCEQICHVGPCDPCQ 293 ******************6 PP
2	zf-NF-X1	17.1	1.2e-05	400	415	4	19
zf-NF-X1 4 HkCqklCHeGpCppCp 19 H+C + CH G+CppC+ XP_022738072.1 400 HQCDQVCHAGDCPPCS 415 ***************6 PP
3	zf-NF-X1	17	1.3e-05	493	511	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG+H C++lCH G CppC XP_022738072.1 493 CGQHYCESLCHSGHCPPCL 511 ******************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 1082 aa Download sequence
MSFQGRNRSR NPSQSTRQEW VPRGSSSMTT TVISSSPTAS NSTPDVNHTS TRNDNRYGQI 60 GRSTNHRRDR EKERNENHVV VRKEIDPNLP QLVQEIQDKL IKSTIECMIC YDMVRRSAPI 120 WSCSSCYSIF HLNCIKKWAR APTSVDLVAE KNQGFNWRCP GCQSVQLTSS KEIRYVCFCG 180 KRTDPPSDLY LTPHSCGELC GKPLEKEHGI GAGLMKDELC PHVCVLQCHP GPCPPCKAFA 240 PPRLCPCGKK VITTRCSDRK SVLSCGQRCD KLLECGRHLC EQICHVGPCD PCQVLINAPC 300 FCKKRVEVVI CGDMVVKGKV KAEEGIFSCN STCGKKLRCC NHYCAEICHP GPCGDCEFMP 360 SKIKSCYCGK TSLQEQRQSC LDPIPTCSEI CAKFLPCQVH QCDQVCHAGD CPPCSVLVTQ 420 KCRCGSTSRK VECCRTTLEN ERFTCDKPCG HKKNCGRHRC SERCCPLSNS NNLPSGDWDP 480 HFCQMACGKK LRCGQHYCES LCHSGHCPPC LETIFTDLTC ACGRTSIPPP LPCGTPPPSC 540 QLPCPVPQAC GHSSSHSCHF GDCPPCSVPV AKECIGGHVV LRNVPCGSKD IRCNKLCGKT 600 RRCGLHACGR TCHPEPCDAS SGAEPGLRTS CGQTCGAPRR DCRHTCTAPC HPSAPCPDVR 660 CDFRVTITCS CGRITATVPC DAGGCTGGFN ADTVFEASII QKLPVPLQPV ESTGKKIPLG 720 QRKLMCDDEC AKLERKRVLA DAFDITPPNL DGLHFGENSV TSELLSDLYR RDPKWVLAIE 780 ERCKFLVLGK NRGTTTGLKV HVFCPMLKDK RDAVRIIAER WKLAISAAGW EPKRFIVVHV 840 TPKSKPPPRI IGFKGSTGIG ALNPLIFDPL VDMDPRLVVS FLDLPREADI SALVLRFGGE 900 CELVWLNDKN ALAVFSDPAR AATAMRRLDH GSVYVGAVTF VQSGGASGAS PASNAWGGTG 960 PSPALKSNPW KKAVVPELGW REDSWGGEES FGGSSDPGSV WKGKEAPIAA SINRWSVLHS 1020 ETGVGSSSGA VQTEDLSKQA GVLPNAGIDS NAANSNSAGV SGGDFNETEP LEVVDDWEKA 1080 YE

Sequence ? help Back to Top

Protein Sequence Length: 1082 aa Download sequence

MSFQGRNRSR NPSQSTRQEW VPRGSSSMTT TVISSSPTAS NSTPDVNHTS TRNDNRYGQI  60
GRSTNHRRDR EKERNENHVV VRKEIDPNLP QLVQEIQDKL IKSTIECMIC YDMVRRSAPI  120
WSCSSCYSIF HLNCIKKWAR APTSVDLVAE KNQGFNWRCP GCQSVQLTSS KEIRYVCFCG  180
KRTDPPSDLY LTPHSCGELC GKPLEKEHGI GAGLMKDELC PHVCVLQCHP GPCPPCKAFA  240
PPRLCPCGKK VITTRCSDRK SVLSCGQRCD KLLECGRHLC EQICHVGPCD PCQVLINAPC  300
FCKKRVEVVI CGDMVVKGKV KAEEGIFSCN STCGKKLRCC NHYCAEICHP GPCGDCEFMP  360
SKIKSCYCGK TSLQEQRQSC LDPIPTCSEI CAKFLPCQVH QCDQVCHAGD CPPCSVLVTQ  420
KCRCGSTSRK VECCRTTLEN ERFTCDKPCG HKKNCGRHRC SERCCPLSNS NNLPSGDWDP  480
HFCQMACGKK LRCGQHYCES LCHSGHCPPC LETIFTDLTC ACGRTSIPPP LPCGTPPPSC  540
QLPCPVPQAC GHSSSHSCHF GDCPPCSVPV AKECIGGHVV LRNVPCGSKD IRCNKLCGKT  600
RRCGLHACGR TCHPEPCDAS SGAEPGLRTS CGQTCGAPRR DCRHTCTAPC HPSAPCPDVR  660
CDFRVTITCS CGRITATVPC DAGGCTGGFN ADTVFEASII QKLPVPLQPV ESTGKKIPLG  720
QRKLMCDDEC AKLERKRVLA DAFDITPPNL DGLHFGENSV TSELLSDLYR RDPKWVLAIE  780
ERCKFLVLGK NRGTTTGLKV HVFCPMLKDK RDAVRIIAER WKLAISAAGW EPKRFIVVHV  840
TPKSKPPPRI IGFKGSTGIG ALNPLIFDPL VDMDPRLVVS FLDLPREADI SALVLRFGGE  900
CELVWLNDKN ALAVFSDPAR AATAMRRLDH GSVYVGAVTF VQSGGASGAS PASNAWGGTG  960
PSPALKSNPW KKAVVPELGW REDSWGGEES FGGSSDPGSV WKGKEAPIAA SINRWSVLHS  1020
ETGVGSSSGA VQTEDLSKQA GVLPNAGIDS NAANSNSAGV SGGDFNETEP LEVVDDWEKA  1080
YE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein