PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022738129.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SBP

Protein Properties

Length: 378aa MW: 41937.8 Da PI: 8.2284

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022738129.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	131	4.3e-41	89	165	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC++dls++k+yhrrhkvCe hsk+++v+++g++qrfCqqCsrfh+l+efDe+krsCr+rL++hn+rrrk+q+ XP_022738129.1 89 CLVDGCNSDLSNCKDYHRRHKVCELHSKTAQVMINGQKQRFCQQCSRFHSLQEFDERKRSCRKRLDGHNRRRRKPQP 165 9*************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MDWNLKAASW DLAEFVEEDV MGIDEINGSS SYKVPRNKVD FSVDLKLGQV GNSGEESLNK 60 WREPAVLKME SSPSKRARAT NNGTHRVFCL VDGCNSDLSN CKDYHRRHKV CELHSKTAQV 120 MINGQKQRFC QQCSRFHSLQ EFDERKRSCR KRLDGHNRRR RKPQPDPLSC SGSYFSKYQG 180 TQMSPFSSLH VYPPTTVVKP AWPGVTNSGT ESRHLNQQQQ LHSPENPNLV LASSPSNYRG 240 GKQFTFLQGE NNTLQNQTPS ETSLCQPLLR AAPFSEGSGG SHSMFCDRLT TPVQDSDRAL 300 SLLSSPQVSG VSLSNLVQPH LFTSVQPLGA SLQNQIIEAV DSAGVGRDTT VHCPGMFHMG 360 SGESSGSEAP QTLPFHWQ

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MDWNLKAASW DLAEFVEEDV MGIDEINGSS SYKVPRNKVD FSVDLKLGQV GNSGEESLNK  60
WREPAVLKME SSPSKRARAT NNGTHRVFCL VDGCNSDLSN CKDYHRRHKV CELHSKTAQV  120
MINGQKQRFC QQCSRFHSLQ EFDERKRSCR KRLDGHNRRR RKPQPDPLSC SGSYFSKYQG  180
TQMSPFSSLH VYPPTTVVKP AWPGVTNSGT ESRHLNQQQQ LHSPENPNLV LASSPSNYRG  240
GKQFTFLQGE NNTLQNQTPS ETSLCQPLLR AAPFSEGSGG SHSMFCDRLT TPVQDSDRAL  300
SLLSSPQVSG VSLSNLVQPH LFTSVQPLGA SLQNQIIEAV DSAGVGRDTT VHCPGMFHMG  360
SGESSGSEAP QTLPFHWQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	145	162	RKRSCRKRLDGHNRRRRK
2	145	163	RKRSCRKRLDGHNRRRRKP
3	146	164	RKRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	7e-72	SBP family protein