PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022738207.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HD-ZIP

Protein Properties

Length: 333aa MW: 37935.7 Da PI: 4.5424

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022738207.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.6	2.6e-19	95	148	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t +q++ Le+ Fe ++++ e++ +LAk+lgL+ rqV +WFqNrRa++k XP_022738207.1 95 KKRRLTVDQVRFLEKSFEVENKLEPERKIQLAKELGLQPRQVAIWFQNRRARWK 148 56689************************************************9 PP
2	HD-ZIP_I/II	129.1	1.8e-41	94	184	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl+ +qv++LE+sFe e+kLeperK +la+eLglqprqva+WFqnrRAR+ktkqlEkdy++L+++y++l+++ ++L ke+++L+ee+ XP_022738207.1 94 EKKRRLTVDQVRFLEKSFEVENKLEPERKIQLAKELGLQPRQVAIWFQNRRARWKTKQLEKDYDTLQASYNSLRADYDNLLKEKDKLKEEV 184 69**************************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MAGRRVCPTN TSTDGGSNNL SLLLRSQRVA SSSEPLDPLF IPGSSPSFLV SGTRSMVSFE 60 DFHRTNRANR SFFRTFDQED NGDEDLDEYF HQPEKKRRLT VDQVRFLEKS FEVENKLEPE 120 RKIQLAKELG LQPRQVAIWF QNRRARWKTK QLEKDYDTLQ ASYNSLRADY DNLLKEKDKL 180 KEEVLQHTDK LLMKEKEKGN SEVSDVNTLS QEPPQKPVVA EAASEGEESK VSLVACKQED 240 ISSAKSDIFD SDSPHYTDGV HSSLLEAADS SYPFEPDQSD SSQDEEDNLS KGLLHPPSYI 300 FPKLEDDDYS DPPASSCNFG FPVEDHAFWS WAY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	143	151	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	8e-41	HD-ZIP family protein