PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022738258.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 151aa    MW: 16921.2 Da    PI: 7.8269
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022738258.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260126.31.5e-395101197
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaC++lrr+Ca+dC+++pyfp+++p++f  vh+++Gasnv kll++lp++ r +a++sl++eA++r++dP+yG+vg+++ lqqq++ ++++la
  XP_022738258.1   5 RCAACRYLRRRCAPDCIFSPYFPSNNPQRFVSVHRIYGASNVGKLLQQLPTHLRAEAADSLYFEAQCRVEDPIYGCVGLVFLLQQQIHDAESQLA 99 
                     6********************************************************************************************99 PP

          DUF260  96 ll 97 
                     ++
  XP_022738258.1 100 KT 101
                     86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    
MNSGRCAACR YLRRRCAPDC IFSPYFPSNN PQRFVSVHRI YGASNVGKLL QQLPTHLRAE  60
AADSLYFEAQ CRVEDPIYGC VGLVFLLQQQ IHDAESQLAK TLAEVAVLKS HAKHPQAQQF  120
EAESDFNNLL QKQLDNVANL SFSNQATSGF M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26660.17e-44LBD family protein