PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022738266.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 236aa MW: 26001.5 Da PI: 6.7874

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022738266.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.4	3e-09	64	115	1	54
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ +h +Er+RR+++ + + Lr+llP ++K ++ Av YIk+L XP_022738266.1 64 KKLMHRDIERQRRQEMATLNASLRTLLPLeY---IKGKRAISDHMNAAVSYIKDL 115 5789***********************77...9****************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MDERFFLVSS NSDPQNTTPQ DKTLDYVPMD GSSGNLYSNM GRRGQKRKLL ASDKSENSND 60 DGKKKLMHRD IERQRRQEMA TLNASLRTLL PLEYIKGKRA ISDHMNAAVS YIKDLRKRID 120 ELSAKRDELK KISGSSGFDQ GMSSNCSFPG SAVVRQSLDG VEVVISAGLG AQALTLSRVL 180 ELLLEEGLVV VNCVSTRIDG GLIHTIQSEV NDLICVDVPG LEQKLNEEIS SLSKIS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	42	48	RRGQKRK
2	42	49	RRGQKRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25410.1	8e-46	bHLH family protein