PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022738273.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 334aa    MW: 38157.4 Da    PI: 6.5888
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022738273.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF72.43.9e-23953145
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                    kr e +snrqvt+skRr+gilKKA+ELS+LCd+ + +++fs+tgk
  XP_022738273.1  9 KRLEGYSNRQVTYSKRRTGILKKAKELSILCDIHIILLMFSPTGK 53
                    67899**************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MGRVKLKIKR LEGYSNRQVT YSKRRTGILK KAKELSILCD IHIILLMFSP TGKPTLFLGE  60
RSNIEEVIEK FAQLTPQERA KRKLESLEAL KKTFQKLDHD VNIQNFLGAT QSVEEMTNEV  120
SMLEAHLTEV HKRLSYWSNP DKIDNIEHLT QMEDSLRESI ERIRIHKGNF GKHHLMSLEC  180
ANQFQNGIPM PIMIGGVQEA QPITWLPNNE NQQMLLHNEP KFLPHRDTEC SVNGSLACSS  240
GYFGSGKQTE IGNSGQVDNV VQENNALNEL GSNAWMNLQL GEQYLYPPYV ASNLLDNEKL  300
RPEMEVNLQE NPAIYQVISN FEIPRPMYNS GHQA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18750.11e-109M-type_MADS family protein