PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022738318.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 993aa MW: 110973 Da PI: 7.6301

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022738318.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	28.4	4.4e-09	217	281	15	81
trihelix 15 remeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81 +++ ++ rgk ++ + +ev++++ ++g++r +k+ kw+n+ ++++k+ e+e+++++++ + +y XP_022738318.1 217 SDVAVQSTRGKTRADKDREVAEFLNKHGINRDAKTAGTKWDNMLGEFRKVYEWERGEKEQVGK--SY 281 6777788899999******************************************98666653..44 PP

Sequence ? help Back to Top
Protein Sequence Length: 993 aa Download sequence
MGDNKGDTTK KQTPQQTQQQ QLSSSPKEPP EESSESRQKH LQQTSAVVVT ATGPPFISAP 60 LYVPIVATSP FEQQFESVNP KRPRYNSGQW KLLPSPSSLQ SQAQMAITTS ESSPSPTRNP 120 INPQTQAPIT AASSSDTALS PPNSPLPTST SGQETNKPEG EQFHHQFRKG KYVSPVWKPN 180 EMLWLARAWR IQYQGGSDAS GYSSRIGHQE IGHFAVSDVA VQSTRGKTRA DKDREVAEFL 240 NKHGINRDAK TAGTKWDNML GEFRKVYEWE RGEKEQVGKS YFRLSPYERK LHRLPASFDE 300 EVFEELSQFM GPRMRTSQSR GASAIASSGD GRPVLSGSRA LPPPPPCKED ELPLSGKPIP 360 LVRTKQLVAT GGGDAFFHGT RGSLLGFDTS LDVGAGLPSS SSKELRRIGK IRMTWEESVS 420 LWAEEGEHHR GRVRLQGSSF LNADELAFFD DAMVACSMEA IEDGPLKGFS FDRFVNGQQV 480 KVFGRRKSSA ASSPSLSLMI PGIIERAQLP FAEPSIRSMP PLEFQDPTDY YVGCLRVPPT 540 TLPSLFELSW HLQEPPPEEY RFPIRRDVYR DLPPGKEVLF TTSNELLDCR AIIYDILSPI 600 IRTNPSLSAA TATGRDSYIG LWDDCISRVV SKFCSGEMVI IRKPSSSSAD QPLQDQWPNV 660 TGFVRNFCLW RGEETDQLRE GQLDPPSSIV EKLLWTYMDL PYILGYYAVG YMVTFCALSR 720 SQDRIIRTDL YSVDLSSPSE RLKALVPCCR IAGLLPLLAD RCFNNVNNVG SYKQFPFSDF 780 ERIDLGNGNI MEMTPNTVIR SFSSKKKWAA VKEIYDILDH RIPHAEFICR ASEKDLTLLF 840 KPRGCKFKPV NCDQLVEALK YVTKALVALH DLCFMHRDLG WDKVLRRSDR ENEWFVCGFD 900 EAVGAPQIYP HTAAEVEARA RHAPEMGRGL HGVKVDVWGV GHLVKTCGLT NVPKMLRELQ 960 NRCLDQNPEQ RPTAADCYHH LLQVQSASSG APY

Sequence ? help Back to Top

Protein Sequence Length: 993 aa Download sequence

MGDNKGDTTK KQTPQQTQQQ QLSSSPKEPP EESSESRQKH LQQTSAVVVT ATGPPFISAP  60
LYVPIVATSP FEQQFESVNP KRPRYNSGQW KLLPSPSSLQ SQAQMAITTS ESSPSPTRNP  120
INPQTQAPIT AASSSDTALS PPNSPLPTST SGQETNKPEG EQFHHQFRKG KYVSPVWKPN  180
EMLWLARAWR IQYQGGSDAS GYSSRIGHQE IGHFAVSDVA VQSTRGKTRA DKDREVAEFL  240
NKHGINRDAK TAGTKWDNML GEFRKVYEWE RGEKEQVGKS YFRLSPYERK LHRLPASFDE  300
EVFEELSQFM GPRMRTSQSR GASAIASSGD GRPVLSGSRA LPPPPPCKED ELPLSGKPIP  360
LVRTKQLVAT GGGDAFFHGT RGSLLGFDTS LDVGAGLPSS SSKELRRIGK IRMTWEESVS  420
LWAEEGEHHR GRVRLQGSSF LNADELAFFD DAMVACSMEA IEDGPLKGFS FDRFVNGQQV  480
KVFGRRKSSA ASSPSLSLMI PGIIERAQLP FAEPSIRSMP PLEFQDPTDY YVGCLRVPPT  540
TLPSLFELSW HLQEPPPEEY RFPIRRDVYR DLPPGKEVLF TTSNELLDCR AIIYDILSPI  600
IRTNPSLSAA TATGRDSYIG LWDDCISRVV SKFCSGEMVI IRKPSSSSAD QPLQDQWPNV  660
TGFVRNFCLW RGEETDQLRE GQLDPPSSIV EKLLWTYMDL PYILGYYAVG YMVTFCALSR  720
SQDRIIRTDL YSVDLSSPSE RLKALVPCCR IAGLLPLLAD RCFNNVNNVG SYKQFPFSDF  780
ERIDLGNGNI MEMTPNTVIR SFSSKKKWAA VKEIYDILDH RIPHAEFICR ASEKDLTLLF  840
KPRGCKFKPV NCDQLVEALK YVTKALVALH DLCFMHRDLG WDKVLRRSDR ENEWFVCGFD  900
EAVGAPQIYP HTAAEVEARA RHAPEMGRGL HGVKVDVWGV GHLVKTCGLT NVPKMLRELQ  960
NRCLDQNPEQ RPTAADCYHH LLQVQSASSG APY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	4e-08	Trihelix family protein