PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022738379.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARF

Protein Properties

Length: 700aa MW: 78744 Da PI: 6.9996

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022738379.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	76.3	3.4e-24	132	232	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 f+kvlt sd++++g +++ +k+a+e+ +++ + +++l+ +d++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD++vF + ++ XP_022738379.1 132 FCKVLTASDTSTHGGFSVLRKHATEClppldMNQATPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFL--RGANG 224 99**************************9555556679********************************************..34899 PP ..EEEEE- CS B3 91 elvvkvfr 98 el+v+v+r XP_022738379.1 225 ELHVGVRR 232 99**98 PP
2	Auxin_resp	104.9	9.2e-35	258	337	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha+st++ F v Y+Pr+ s+F+++++k+++al++k++vGmRf+m+fe+eds+err+sGt++gv+d++p +W++S WrsLk XP_022738379.1 258 ASHAVSTQTLFVVHYKPRT--SQFIIRLNKYLEALNNKFTVGMRFRMRFEGEDSPERRFSGTIAGVEDFSP-HWKDSTWRSLK 337 789*************6..9*********************************************.*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 700 aa Download sequence
MMANRGRSFS QTINVSSEVI GNGGDDLNME LWKLCAGPLV DVPRAEDRVY YFPQGHMEQL 60 EALTYQELNQ RIPLFNLQPK ILCRVVHIQL LAEQETDEVY AQITLLPEPN QPEPTTPDPC 120 PPESQRSTVH SFCKVLTASD TSTHGGFSVL RKHATECLPP LDMNQATPTQ ELVAKDLHGY 180 EWRFKHIFRG QPRRHLLTTG WSTFVTSKRL VAGDSFVFLR GANGELHVGV RRVARQQSSM 240 PSSVISSQSM HLGVLATASH AVSTQTLFVV HYKPRTSQFI IRLNKYLEAL NNKFTVGMRF 300 RMRFEGEDSP ERRFSGTIAG VEDFSPHWKD STWRSLKVQW DEPSSIPRPD RVSPWEIEPF 360 AQPIPPTLAQ PVVTKYKRPR PPNEIPALDL PSTASAPWNT EVTHSPDLAW RNITPEGKRN 420 ENHVIWHHLQ TEMNSSCSSV SKTQNERSRL SSPGMSVYPL MFPEAREDNK SVRGWPVHSG 480 FSNPQINNVS TFDPIEKVKK SETAASCRLF GIELINHSAS STHLERTPTQ LSTMTTGTTE 540 GHGLSTLSPI DSDQKSDISK DSKEKMQEQL QLSAKEIQSR QSCSSSTRSC TKVQMQGVAI 600 GRAVDLGMLE GYDQLIDELE RLFHIKGELR PRNKWEIVYT DDEGDMMLVG DDPWLEFCNM 660 VRRIFICSSQ DGKKMSTGSK LPLASIEGQG TVISSYSAEN

Sequence ? help Back to Top

Protein Sequence Length: 700 aa Download sequence

MMANRGRSFS QTINVSSEVI GNGGDDLNME LWKLCAGPLV DVPRAEDRVY YFPQGHMEQL  60
EALTYQELNQ RIPLFNLQPK ILCRVVHIQL LAEQETDEVY AQITLLPEPN QPEPTTPDPC  120
PPESQRSTVH SFCKVLTASD TSTHGGFSVL RKHATECLPP LDMNQATPTQ ELVAKDLHGY  180
EWRFKHIFRG QPRRHLLTTG WSTFVTSKRL VAGDSFVFLR GANGELHVGV RRVARQQSSM  240
PSSVISSQSM HLGVLATASH AVSTQTLFVV HYKPRTSQFI IRLNKYLEAL NNKFTVGMRF  300
RMRFEGEDSP ERRFSGTIAG VEDFSPHWKD STWRSLKVQW DEPSSIPRPD RVSPWEIEPF  360
AQPIPPTLAQ PVVTKYKRPR PPNEIPALDL PSTASAPWNT EVTHSPDLAW RNITPEGKRN  420
ENHVIWHHLQ TEMNSSCSSV SKTQNERSRL SSPGMSVYPL MFPEAREDNK SVRGWPVHSG  480
FSNPQINNVS TFDPIEKVKK SETAASCRLF GIELINHSAS STHLERTPTQ LSTMTTGTTE  540
GHGLSTLSPI DSDQKSDISK DSKEKMQEQL QLSAKEIQSR QSCSSSTRSC TKVQMQGVAI  600
GRAVDLGMLE GYDQLIDELE RLFHIKGELR PRNKWEIVYT DDEGDMMLVG DDPWLEFCNM  660
VRRIFICSSQ DGKKMSTGSK LPLASIEGQG TVISSYSAEN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	377	381	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G23980.1	0.0	ARF family protein