PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022738381.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARF

Protein Properties

Length: 692aa MW: 77899.1 Da PI: 7.215

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022738381.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	76.3	3.4e-24	124	224	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 f+kvlt sd++++g +++ +k+a+e+ +++ + +++l+ +d++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD++vF + ++ XP_022738381.1 124 FCKVLTASDTSTHGGFSVLRKHATEClppldMNQATPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFL--RGANG 216 99**************************9555556679********************************************..34899 PP ..EEEEE- CS B3 91 elvvkvfr 98 el+v+v+r XP_022738381.1 217 ELHVGVRR 224 99**98 PP
2	Auxin_resp	105	9.1e-35	250	329	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha+st++ F v Y+Pr+ s+F+++++k+++al++k++vGmRf+m+fe+eds+err+sGt++gv+d++p +W++S WrsLk XP_022738381.1 250 ASHAVSTQTLFVVHYKPRT--SQFIIRLNKYLEALNNKFTVGMRFRMRFEGEDSPERRFSGTIAGVEDFSP-HWKDSTWRSLK 329 789*************6..9*********************************************.*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 692 aa Download sequence
MSPPKVQNKK LIGNGGDDLN MELWKLCAGP LVDVPRAEDR VYYFPQGHME QLEALTYQEL 60 NQRIPLFNLQ PKILCRVVHI QLLAEQETDE VYAQITLLPE PNQPEPTTPD PCPPESQRST 120 VHSFCKVLTA SDTSTHGGFS VLRKHATECL PPLDMNQATP TQELVAKDLH GYEWRFKHIF 180 RGQPRRHLLT TGWSTFVTSK RLVAGDSFVF LRGANGELHV GVRRVARQQS SMPSSVISSQ 240 SMHLGVLATA SHAVSTQTLF VVHYKPRTSQ FIIRLNKYLE ALNNKFTVGM RFRMRFEGED 300 SPERRFSGTI AGVEDFSPHW KDSTWRSLKV QWDEPSSIPR PDRVSPWEIE PFAQPIPPTL 360 AQPVVTKYKR PRPPNEIPAL DLPSTASAPW NTEVTHSPDL AWRNITPEGK RNENHVIWHH 420 LQTEMNSSCS SVSKTQNERS RLSSPGMSVY PLMFPEARED NKSVRGWPVH SGFSNPQINN 480 VSTFDPIEKV KKSETAASCR LFGIELINHS ASSTHLERTP TQLSTMTTGT TEGHGLSTLS 540 PIDSDQKSDI SKDSKEKMQE QLQLSAKEIQ SRQSCSSSTR SCTKVQMQGV AIGRAVDLGM 600 LEGYDQLIDE LERLFHIKGE LRPRNKWEIV YTDDEGDMML VGDDPWLEFC NMVRRIFICS 660 SQDGKKMSTG SKLPLASIEG QGTVISSYSA EN

Sequence ? help Back to Top

Protein Sequence Length: 692 aa Download sequence

MSPPKVQNKK LIGNGGDDLN MELWKLCAGP LVDVPRAEDR VYYFPQGHME QLEALTYQEL  60
NQRIPLFNLQ PKILCRVVHI QLLAEQETDE VYAQITLLPE PNQPEPTTPD PCPPESQRST  120
VHSFCKVLTA SDTSTHGGFS VLRKHATECL PPLDMNQATP TQELVAKDLH GYEWRFKHIF  180
RGQPRRHLLT TGWSTFVTSK RLVAGDSFVF LRGANGELHV GVRRVARQQS SMPSSVISSQ  240
SMHLGVLATA SHAVSTQTLF VVHYKPRTSQ FIIRLNKYLE ALNNKFTVGM RFRMRFEGED  300
SPERRFSGTI AGVEDFSPHW KDSTWRSLKV QWDEPSSIPR PDRVSPWEIE PFAQPIPPTL  360
AQPVVTKYKR PRPPNEIPAL DLPSTASAPW NTEVTHSPDL AWRNITPEGK RNENHVIWHH  420
LQTEMNSSCS SVSKTQNERS RLSSPGMSVY PLMFPEARED NKSVRGWPVH SGFSNPQINN  480
VSTFDPIEKV KKSETAASCR LFGIELINHS ASSTHLERTP TQLSTMTTGT TEGHGLSTLS  540
PIDSDQKSDI SKDSKEKMQE QLQLSAKEIQ SRQSCSSSTR SCTKVQMQGV AIGRAVDLGM  600
LEGYDQLIDE LERLFHIKGE LRPRNKWEIV YTDDEGDMML VGDDPWLEFC NMVRRIFICS  660
SQDGKKMSTG SKLPLASIEG QGTVISSYSA EN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	369	373	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G23980.1	0.0	ARF family protein