PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022738463.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

WOX

Protein Properties

Length: 357aa MW: 40686.4 Da PI: 7.9347

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022738463.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	68	1.2e-21	75	134	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql++Leel+++ +r+p+a+++++++++l +++ ++V++WFqN++a+e++ XP_022738463.1 75 SRWNPTPEQLRTLEELYRRgTRTPTADQIQHITAQLrrygKIEGKNVFYWFQNHKARERQ 134 7***************99************************************97 PP
2	Wus_type_Homeobox	115.8	2.1e-37	74	136	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+PtpeQ++ Leely++G+rtP++++iq+ita+L++yGkie+kNVfyWFQN+kaRerqk+ XP_022738463.1 74 SSRWNPTPEQLRTLEELYRRGTRTPTADQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQKR 136 79***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MWMMGYNEGA EFNMPDSFNG RKLRPLIPRP IPSANNSPCL SRINGTDFFA LNHHLTMGDQ 60 NKRDFNTQPA LVVSSRWNPT PEQLRTLEEL YRRGTRTPTA DQIQHITAQL RRYGKIEGKN 120 VFYWFQNHKA RERQKRRRQM ESAQDEHSQE TDIFQRKDSG ANRTGYEVEQ AKNWALPTNY 180 STLAEESVSI QTAAKAAAAE CRADGWIQFE EGELQQRRNF VEKNGTWQKM QFCYSCFPPT 240 ASTTPPEAAA AATSTATTIT TAPIPTTIRT MDPKQQLVKS HDLNIFIAPC RHNDIDHFNT 300 ARNQEDAPGN SQTLQLFPLR SGDGTDNSKE KEHELSVAAV TANLIPYQFF EFLPLKN

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MWMMGYNEGA EFNMPDSFNG RKLRPLIPRP IPSANNSPCL SRINGTDFFA LNHHLTMGDQ  60
NKRDFNTQPA LVVSSRWNPT PEQLRTLEEL YRRGTRTPTA DQIQHITAQL RRYGKIEGKN  120
VFYWFQNHKA RERQKRRRQM ESAQDEHSQE TDIFQRKDSG ANRTGYEVEQ AKNWALPTNY  180
STLAEESVSI QTAAKAAAAE CRADGWIQFE EGELQQRRNF VEKNGTWQKM QFCYSCFPPT  240
ASTTPPEAAA AATSTATTIT TAPIPTTIRT MDPKQQLVKS HDLNIFIAPC RHNDIDHFNT  300
ARNQEDAPGN SQTLQLFPLR SGDGTDNSKE KEHELSVAAV TANLIPYQFF EFLPLKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	5e-56	WOX family protein