PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022738486.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

G2-like

Protein Properties

Length: 455aa MW: 50580.9 Da PI: 6.7927

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022738486.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.1	8.4e-28	217	269	3	56
G2-like 3 rlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 +++WtpeLH++Fv+av+qL G+++A+P++ilelmkv+gLt+++v+SHLQkYR++ XP_022738486.1 217 KVDWTPELHKKFVQAVDQL-GIDQAIPSRILELMKVEGLTRHNVASHLQKYRMH 269 789**************.******************************96 PP
2	Myb_DNA-binding	43.2	9e-14	218	267	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e+++++v+av qlG + +++I + m +g+t+ ++ s++qky+ XP_022738486.1 218 VDWTPELHKKFVQAVDQLGIDqaIPSRILELMKvEGLTRHNVASHLQKYR 267 57***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence
MMKCIAFGAV EFLRKPLCED KLRNIWQHVV HKAFNAGGND LSESLKPIKE SVVSMLHLQL 60 ENGKSKNEDS DKTEDVPVIH GNDREPSPGS DKYPAPSTPQ LEQGARLLDD VDCQDHTNCS 120 TEKESGEHDG ESKSVETTSG NTIAEVTAPV GQSHGPTETM VKEEADLFDG IKGESTMYSH 180 PQNRENSEGS HTGAEKPSTV SGLHSSYLNK VNRKRLKVDW TPELHKKFVQ AVDQLGIDQA 240 IPSRILELMK VEGLTRHNVA SHLQKYRMHR RHILPKEDGR RWPQRDQTQR SCYPHKPIMA 300 FPPYHSNHVV PIGPVYPMWG APPHPASIQM WGSQGYPPWQ PAESWHLKPY PGVHADAWGC 360 PVMPPPQGYC CTFTQNASGF HYSSTMDNRS GMPQNSVEHQ PAEEVIDKVV KEAINKPWLP 420 LPLGLKPPAT DSVLAELSRQ GISTIPTHIS GSNSC

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence

MMKCIAFGAV EFLRKPLCED KLRNIWQHVV HKAFNAGGND LSESLKPIKE SVVSMLHLQL  60
ENGKSKNEDS DKTEDVPVIH GNDREPSPGS DKYPAPSTPQ LEQGARLLDD VDCQDHTNCS  120
TEKESGEHDG ESKSVETTSG NTIAEVTAPV GQSHGPTETM VKEEADLFDG IKGESTMYSH  180
PQNRENSEGS HTGAEKPSTV SGLHSSYLNK VNRKRLKVDW TPELHKKFVQ AVDQLGIDQA  240
IPSRILELMK VEGLTRHNVA SHLQKYRMHR RHILPKEDGR RWPQRDQTQR SCYPHKPIMA  300
FPPYHSNHVV PIGPVYPMWG APPHPASIQM WGSQGYPPWQ PAESWHLKPY PGVHADAWGC  360
PVMPPPQGYC CTFTQNASGF HYSSTMDNRS GMPQNSVEHQ PAEEVIDKVV KEAINKPWLP  420
LPLGLKPPAT DSVLAELSRQ GISTIPTHIS GSNSC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	1e-104	ARR-B family protein