PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022738526.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 434aa MW: 48903.3 Da PI: 8.381

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022738526.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	68.3	1.5e-21	27	115	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm...rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+k+e+laL+ea++e++ +lrrg+lk+ +W++vs+++ ++ ++s++qC++k+e+l+kry+++k+++ k+ + ss++ +f l+ XP_022738526.1 27 CWSKEETLALVEAYKEKWFALRRGNLKASDWDAVSAAVssaSDPETTKSSIQCRHKIEKLRKRYRAEKQRSLKNPGKFSSSWDMFPVLD 115 7***********************************88888899***********************99999*****9887 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MSTETSPPPP PPQSSSATAK RRVPPPCWSK EETLALVEAY KEKWFALRRG NLKASDWDAV 60 SAAVSSASDP ETTKSSIQCR HKIEKLRKRY RAEKQRSLKN PGKFSSSWDM FPVLDAMNFA 120 STSVAGSDDQ DHVVDHKVSV FDGFCLKLKN REKIDGNSGS NLGFDHDFRD GYGSKFDFDH 180 KFGAGYGVKW QGNRDFMAKE IKKIKSDGRI GDGHGCMVDF DHSFRQGVDS VGEFPLKTLG 240 DRSFLNLGFK PKNYGSPNID CDYDNDLEEY IIDEEMGFGA KVSGGWDSVH QGFHPDRCGR 300 VDRSFNPGVD CGGLNELASC SRPGLGRKNG IAGVKRGVDP VEEMVSSIKL LAERFVRMEK 360 MKIEMVKEIE KMRMEMEMKH NEMMLESQQK IIDAFAEALL EKKKRKKKPT LRSPNMNGNG 420 IEEWQGDDNK KRWI

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MSTETSPPPP PPQSSSATAK RRVPPPCWSK EETLALVEAY KEKWFALRRG NLKASDWDAV  60
SAAVSSASDP ETTKSSIQCR HKIEKLRKRY RAEKQRSLKN PGKFSSSWDM FPVLDAMNFA  120
STSVAGSDDQ DHVVDHKVSV FDGFCLKLKN REKIDGNSGS NLGFDHDFRD GYGSKFDFDH  180
KFGAGYGVKW QGNRDFMAKE IKKIKSDGRI GDGHGCMVDF DHSFRQGVDS VGEFPLKTLG  240
DRSFLNLGFK PKNYGSPNID CDYDNDLEEY IIDEEMGFGA KVSGGWDSVH QGFHPDRCGR  300
VDRSFNPGVD CGGLNELASC SRPGLGRKNG IAGVKRGVDP VEEMVSSIKL LAERFVRMEK  360
MKIEMVKEIE KMRMEMEMKH NEMMLESQQK IIDAFAEALL EKKKRKKKPT LRSPNMNGNG  420
IEEWQGDDNK KRWI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	401	409	EKKKRKKKP
2	402	408	KKKRKKK
3	403	407	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44730.1	4e-24	Trihelix family protein