PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022738572.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 797aa    MW: 88874 Da    PI: 6.3205
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022738572.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.65.2e-1984139156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t+ q++eLe++F++ r+p+ ++r +L+++lgL  rqVk+WFqNrR+++k
  XP_022738572.1  84 KKRYHRHTARQIQELEAVFKERRHPDNKQRMKLSQELGLRPRQVKFWFQNRRTQMK 139
                     688899***********************************************998 PP
2START141.21.1e-442815072206
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS..............SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskv.............dsgealrasgvvdmvlallveellddkeqWdetla....ka 79 
                     la + ++elvk+  a+ep+W +    eng+e l  +e ++v             +++ea+r+s+vv+m++++lv  +ld + +W+e ++     a
  XP_022738572.1 281 LAMSSLDELVKMCRANEPLWIRNN--ENGKELLNLEEHARVfhwplnlkqcstkFRTEASRDSAVVIMNSVTLVDAFLDAN-KWTELFPsivaGA 372
                     5677899***************99..**********99999****************************************.*******99999* PP

                     EEEEEECTT.....EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE....TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEE CS
           START  80 etlevissg.....galqlmvaelqalsplvp.RdfvfvRyirq...lgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvt 165
                     + ++vis+g     g lql++aelq+lsplvp R+ +f+Ry++q   + +  w+ivd       ++  +ss+    ++pSg+li++++ng+s+vt
  XP_022738572.1 373 KSVQVISPGvsgtnGCLQLIYAELQVLSPLVPtREAYFLRYCQQlnlDDETYWAIVDFPFHGFHSNL-QSSFPLYMRRPSGCLIQDMPNGYSRVT 466
                     ********************************************99888888*****6555444444.777777777****************** PP

                     EEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 166 wvehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     w+eh++ +++ +h+l+ ++v +g+a+ga +w+a l+rqce+
  XP_022738572.1 467 WLEHAEIEKKPVHQLFSHFVYNGMAFGAHRWLAVLERQCER 507
                     ***************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 797 aa     Download sequence    
MYGDCQVISS MGGNVVSSET LFSSPIQNPN FNFLPFQPLP PMLPKEENEL LLRGKEGMDN  60
GSGSEQVEEK SGNEQESNEQ PPKKKRYHRH TARQIQELEA VFKERRHPDN KQRMKLSQEL  120
GLRPRQVKFW FQNRRTQMKA QQGRSDNVIL RAENESLKNE FYQLQGELIK LACPNCGGPA  180
VTGGVSFEEL RTENARLREE LEWVSAIASR YIEKPIQTMS AAPAMMPHLD LDMSIDPRHF  240
TEPMVSCAEM MPVPMLPETA SYPENNNLIL MNEEKTVAME LAMSSLDELV KMCRANEPLW  300
IRNNENGKEL LNLEEHARVF HWPLNLKQCS TKFRTEASRD SAVVIMNSVT LVDAFLDANK  360
WTELFPSIVA GAKSVQVISP GVSGTNGCLQ LIYAELQVLS PLVPTREAYF LRYCQQLNLD  420
DETYWAIVDF PFHGFHSNLQ SSFPLYMRRP SGCLIQDMPN GYSRVTWLEH AEIEKKPVHQ  480
LFSHFVYNGM AFGAHRWLAV LERQCERNGS LMARNITDLR VIPSPEARKN LMRLAQRMIR  540
TFCVNISTSS GRLWTALPDS SDDTVRISTK KVTEPGQPNG LILSAVSTTW LPYPHYEVFD  600
LLRDESRRAQ LEVFSNGNAL HKVAHIANGA HPGNCISLLR INVASNSTQH VDLILQESCT  660
DRSGSLVVYS TVDVASVQLE MSGEDPSHIP LLPLGFSITP VELIRDASSN EGKSVPPSEK  720
ANGHISGSLL TVGLQILAST IPSANINFSS IAAINNNLCT TVHQIRAALS SNSTPSCPDN  780
GNGVGSCTEG GASAQEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46880.10.0HD-ZIP family protein