PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022738595.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HD-ZIP

Protein Properties

Length: 236aa MW: 27400.5 Da PI: 6.5392

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022738595.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61	1.9e-19	29	83	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++++f+++q++ Le+ Fe++ ++ +++ +LA++lgL+ rqV +WFqNrRa++k XP_022738595.1 29 KNKRRFSDQQIRLLESIFESETKLEPRKKLQLARELGLQPRQVAIWFQNRRARWK 83 56789*************************************************9 PP
2	HD-ZIP_I/II	122.7	1.8e-39	30	121	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +krr+s++q++lLE+ Fe+e+kLep++K +lareLglqprqva+WFqnrRAR+k+kq+E+dy++L+++yd+l+++ e+L+ke+++L ++++ XP_022738595.1 30 NKRRFSDQQIRLLESIFESETKLEPRKKLQLARELGLQPRQVAIWFQNRRARWKSKQIEQDYRTLRANYDNLASRFESLKKEKQSLVLQMQK 121 79************************************************************************************988876 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MERDYDPAAH EAVADQEPQT PRKKKNKMKN KRRFSDQQIR LLESIFESET KLEPRKKLQL 60 ARELGLQPRQ VAIWFQNRRA RWKSKQIEQD YRTLRANYDN LASRFESLKK EKQSLVLQMQ 120 KLNELLKEPH DVNKASKGLD GSSTGGGSEY GVTKCEPEGE PNPSFQQAGL EDRGFLDLQI 180 ENDRDIKHAG QPGEEFLSMD EYRNDSPASP EKLYGFDSAD MFDHSCSNSQ WLNFWT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	22	33	RKKKNKMKNKRR
2	78	86	RRARWKSKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61890.1	1e-47	HD-ZIP family protein