PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022738702.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 641aa MW: 71712.9 Da PI: 5.2001

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022738702.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	46.2	8.4e-15	442	488	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h ErrRR++iN++f L++l+P++ K++K++iL ++eY+++L+ XP_022738702.1 442 NHVLSERRRREKINERFMILKSLVPSN-----SKVDKVSILDVTIEYLQDLE 488 79999*******************8.....7**************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 641 aa Download sequence
MATGVQNQES VPKNLKKQLA LAVRDIQWGY AIFWSISARR PGVLEWADGY YNGDIKTRKT 60 VQAVELNADQ LGLQRSEQLR ELYESLSAGD SSPQARRPSA ALSPEDLTDT EWYYLVCMSF 120 VFNIGQGLPG RTLSSGQSIW LFNAHHAESK VFSRSLLAKS ASIQTVVCFP FSGGVIELGV 180 TDLVLEDLCL IQRIKTSFLD APQTIGSNKS ILVAARTGND KDLACPALDP QILDTKLSPL 240 LDCEQLEMAS PNDSSDGFEP NHPAEDSFMI EGINGGASQV QSWQFMDEEF SNCVHHSLNS 300 SDCISQTFVD HGNVVPLCQG EKDNDNGLQD VEECNKTKLT SLDLRSDDLH YQTVLSALLK 360 SSHQLILGPH FRNSNQESSF VSWKKNVLVK SQKARDETPQ KLLKKILFEV PQMHDKGLLE 420 SPEDNGVRDA AWRPEADEIC GNHVLSERRR REKINERFMI LKSLVPSNSK VDKVSILDVT 480 IEYLQDLERR VEELESCREL IELEARMKRK SQDHVERTSD NYGNNKITNG KKSSLSKRKA 540 CDIDEAEQEI DYVISKDGST DNVTVSTNNK DFLIEFRCPF REGILLEIMD ALSILNLDCH 600 SVQSSTTEGI LSLTIKSKYK GSTVAKVGTI KQALQRVAWK C

Sequence ? help Back to Top

Protein Sequence Length: 641 aa Download sequence

MATGVQNQES VPKNLKKQLA LAVRDIQWGY AIFWSISARR PGVLEWADGY YNGDIKTRKT  60
VQAVELNADQ LGLQRSEQLR ELYESLSAGD SSPQARRPSA ALSPEDLTDT EWYYLVCMSF  120
VFNIGQGLPG RTLSSGQSIW LFNAHHAESK VFSRSLLAKS ASIQTVVCFP FSGGVIELGV  180
TDLVLEDLCL IQRIKTSFLD APQTIGSNKS ILVAARTGND KDLACPALDP QILDTKLSPL  240
LDCEQLEMAS PNDSSDGFEP NHPAEDSFMI EGINGGASQV QSWQFMDEEF SNCVHHSLNS  300
SDCISQTFVD HGNVVPLCQG EKDNDNGLQD VEECNKTKLT SLDLRSDDLH YQTVLSALLK  360
SSHQLILGPH FRNSNQESSF VSWKKNVLVK SQKARDETPQ KLLKKILFEV PQMHDKGLLE  420
SPEDNGVRDA AWRPEADEIC GNHVLSERRR REKINERFMI LKSLVPSNSK VDKVSILDVT  480
IEYLQDLERR VEELESCREL IELEARMKRK SQDHVERTSD NYGNNKITNG KKSSLSKRKA  540
CDIDEAEQEI DYVISKDGST DNVTVSTNNK DFLIEFRCPF REGILLEIMD ALSILNLDCH  600
SVQSSTTEGI LSLTIKSKYK GSTVAKVGTI KQALQRVAWK C

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	447	452	ERRRRE
2	448	453	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41315.1	0.0	bHLH family protein