PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022738749.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 215aa    MW: 24873.6 Da    PI: 7.1507
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022738749.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF99.11.7e-31959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien snrqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye+ss
  XP_022738749.1  9 KRIENASNRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSTRGKLYEFSS 59
                    79***********************************************96 PP
2K-box75.41.6e-2579169999
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                      ++a + ++q +++ + k+ie L+ ++R+llG +Le++sl +Lq Le+qL++sl++iR++Kn l++eqie+l++ ek+l een +Lr++ e
  XP_022738749.1  79 ISKAVEGNMQDDAESMAKKIELLEDSKRKLLGYGLEPCSLSDLQLLENQLDRSLSRIRARKNLLFFEQIEKLKEEEKRLVEENAKLREECE 169
                     56777889*******************************************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MVRGKTQMKR IENASNRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFST RGKLYEFSSS  60
SMNKTIDRYQ KREKDLGIIS KAVEGNMQDD AESMAKKIEL LEDSKRKLLG YGLEPCSLSD  120
LQLLENQLDR SLSRIRARKN LLFFEQIEKL KEEEKRLVEE NAKLREECEM KPRHWSASLS  180
DELQNPSMEV EVEVETELFI GPPEIRSIQK PECAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11880.14e-67MIKC_MADS family protein