PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022738805.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 1161aa MW: 131665 Da PI: 8.1388

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022738805.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.5	2.1e-10	435	480	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r++WT+eEd+ l+ v++ G g+W Ia +g +Rt+ qc r+q XP_022738805.1 435 RNPWTAEEDKNLLLIVQEKGIGNWFDIAVSLGSNRTPFQCLARYQR 480 79******************************************96 PP
2	Myb_DNA-binding	43	1.1e-13	489	532	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 WT+eEd++l av+ +G +W ++a+t+ gRt+ qc +rw k XP_022738805.1 489 REWTEEEDDQLRIAVEVFGECDWQSVASTLK-GRTGTQCSNRWKK 532 68**************************9.*********98 PP
3	Myb_DNA-binding	47.2	5e-15	542	585	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 grWT Ed+ l+ av ++G+++Wk+Ia+ ++ gRt qc++rw + XP_022738805.1 542 GRWTHAEDKYLKVAVMLFGPKNWKKIAEVVP-GRTQVQCRERWVN 585 8****************************.*********87 PP
4	Myb_DNA-binding	42.8	1.2e-13	596	635	4	45
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT+eEd++l a++++G W++Ia +m Rt++qc rw XP_022738805.1 596 WTKEEDLRLEAAIEEHGYC-WSKIATCML-SRTDNQCWRRWK 635 ***************99.****9.*********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 1161 aa Download sequence
MSLSDQYDSG EEVVDDDELS SSEDGDGFDE DMEALKKACL RTGTDLNDLQ ITVADKDLPS 60 TAGAVASASA ASADSGSEDD LELFRSIRSR FALSEDVCEP LSMKPLCTLP PISSDDDAED 120 DFETLRAIQK RFLAYSTNDT WKNSTADHIE KTEPIYKSST PLEDATCDNI CEQFQDYEKA 180 DNISHFPSDN TEMHPVGLVQ WNQSDANELS TMADKSSRFP KSAQLLINAI KKNRSYQKFL 240 RSKLTQIEVK IEENKKLKER VKILRDFQVS CKKITGRALS MKKDPRIQLI SARKSRTSKD 300 LEVNDKKVTA DYGPPENSSA CNYRMALTKF PLTLQRKKWT REEKENLEKG IRQQFQERAL 360 QFSVDWLSSD GSSGDGSNLD NIIATVKDLE ITPEMIREFL PKVNWDQLAS LYIKGRSAAE 420 CESHWLNHED PLINRNPWTA EEDKNLLLIV QEKGIGNWFD IAVSLGSNRT PFQCLARYQR 480 SLNACILKRE WTEEEDDQLR IAVEVFGECD WQSVASTLKG RTGTQCSNRW KKSLHPTRQR 540 VGRWTHAEDK YLKVAVMLFG PKNWKKIAEV VPGRTQVQCR ERWVNSLDPA LNLGIWTKEE 600 DLRLEAAIEE HGYCWSKIAT CMLSRTDNQC WRRWKLLHPE EVPLLQEARR IRKATLITNF 660 VDRESERPAL GPNDFNISLP MITPTSEPEN TILPSKENRK ERGRRPESER ENDAALRHFS 720 ENRRHQSCGK RAQAFSVEVP GMINENEAKT ANGHDAARKK QRNPYSENNN FTEPAQVVAF 780 PKKRKRKQPS GSNNYTEAAQ HVAIQKKRRR KPPSGHTNCS DQVEDDVVQV EKRKQQAESN 840 KCIESMQDNS SSHPLSTMCM TTNQEAESFG SSLTKKMKKN PKLSLKQCSK RVHAELGEEQ 900 NSVCSENSVF SGGIDGAEVM QNSVVVVDIL GVDDASGERS TAKPGSRTKT HMNLSTSQSS 960 RITGAEGFEN FSSNKNTKKR RNSSLRQYCR RRKSNVPSGD EDDIMLASLL QDKLKKRIPS 1020 FTDGDKKTPA CFLRNKLKKK RHQIVENAPL STLKGEDQSR KINQMRSGLQ HCDLVISENS 1080 AFHSRLRQTI MHSDRDIGVV DVVDVVDDTV APHEVVREAS RMNEGGKLQA DDITLACLRR 1140 RLKKRRLSIA QNGKTKELPL E

Sequence ? help Back to Top

Protein Sequence Length: 1161 aa Download sequence

MSLSDQYDSG EEVVDDDELS SSEDGDGFDE DMEALKKACL RTGTDLNDLQ ITVADKDLPS  60
TAGAVASASA ASADSGSEDD LELFRSIRSR FALSEDVCEP LSMKPLCTLP PISSDDDAED  120
DFETLRAIQK RFLAYSTNDT WKNSTADHIE KTEPIYKSST PLEDATCDNI CEQFQDYEKA  180
DNISHFPSDN TEMHPVGLVQ WNQSDANELS TMADKSSRFP KSAQLLINAI KKNRSYQKFL  240
RSKLTQIEVK IEENKKLKER VKILRDFQVS CKKITGRALS MKKDPRIQLI SARKSRTSKD  300
LEVNDKKVTA DYGPPENSSA CNYRMALTKF PLTLQRKKWT REEKENLEKG IRQQFQERAL  360
QFSVDWLSSD GSSGDGSNLD NIIATVKDLE ITPEMIREFL PKVNWDQLAS LYIKGRSAAE  420
CESHWLNHED PLINRNPWTA EEDKNLLLIV QEKGIGNWFD IAVSLGSNRT PFQCLARYQR  480
SLNACILKRE WTEEEDDQLR IAVEVFGECD WQSVASTLKG RTGTQCSNRW KKSLHPTRQR  540
VGRWTHAEDK YLKVAVMLFG PKNWKKIAEV VPGRTQVQCR ERWVNSLDPA LNLGIWTKEE  600
DLRLEAAIEE HGYCWSKIAT CMLSRTDNQC WRRWKLLHPE EVPLLQEARR IRKATLITNF  660
VDRESERPAL GPNDFNISLP MITPTSEPEN TILPSKENRK ERGRRPESER ENDAALRHFS  720
ENRRHQSCGK RAQAFSVEVP GMINENEAKT ANGHDAARKK QRNPYSENNN FTEPAQVVAF  780
PKKRKRKQPS GSNNYTEAAQ HVAIQKKRRR KPPSGHTNCS DQVEDDVVQV EKRKQQAESN  840
KCIESMQDNS SSHPLSTMCM TTNQEAESFG SSLTKKMKKN PKLSLKQCSK RVHAELGEEQ  900
NSVCSENSVF SGGIDGAEVM QNSVVVVDIL GVDDASGERS TAKPGSRTKT HMNLSTSQSS  960
RITGAEGFEN FSSNKNTKKR RNSSLRQYCR RRKSNVPSGD EDDIMLASLL QDKLKKRIPS  1020
FTDGDKKTPA CFLRNKLKKK RHQIVENAPL STLKGEDQSR KINQMRSGLQ HCDLVISENS  1080
AFHSRLRQTI MHSDRDIGVV DVVDVVDDTV APHEVVREAS RMNEGGKLQA DDITLACLRR  1140
RLKKRRLSIA QNGKTKELPL E

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	782	787	KKRKRK
2	782	811	KKRKRKQPSGSNNYTEAAQHVAIQKKRRRK
3	783	812	KKRKRKQPSGSNNYTEAAQHVAIQKKRRRK
4	805	812	QKKRRRKP
5	806	811	KKRRRK
6	806	834	KKRRRKPPSGHTNCSDQVEDDVVQVEKRK
7	807	835	KKRRRKPPSGHTNCSDQVEDDVVQVEKRK
8	808	836	KKRRRKPPSGHTNCSDQVEDDVVQVEKRK
9	978	993	KKRRNSSLRQYCRRRK
10	979	994	KKRRNSSLRQYCRRRK
11	1012	1017	DKLKKR
12	1139	1147	RRRLKKRRL
13	1140	1148	RRRLKKRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18100.1	0.0	MYB family protein