PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022738806.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 931aa MW: 106124 Da PI: 9.9086

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022738806.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.8	1.6e-10	205	250	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r++WT+eEd+ l+ v++ G g+W Ia +g +Rt+ qc r+q XP_022738806.1 205 RNPWTAEEDKNLLLIVQEKGIGNWFDIAVSLGSNRTPFQCLARYQR 250 79******************************************96 PP
2	Myb_DNA-binding	43.3	8.2e-14	259	302	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 WT+eEd++l av+ +G +W ++a+t+ gRt+ qc +rw k XP_022738806.1 259 REWTEEEDDQLRIAVEVFGECDWQSVASTLK-GRTGTQCSNRWKK 302 68**************************9.*********98 PP
3	Myb_DNA-binding	47.6	3.8e-15	312	355	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 grWT Ed+ l+ av ++G+++Wk+Ia+ ++ gRt qc++rw + XP_022738806.1 312 GRWTHAEDKYLKVAVMLFGPKNWKKIAEVVP-GRTQVQCRERWVN 355 8****************************.*********87 PP
4	Myb_DNA-binding	43.2	9.3e-14	366	405	4	45
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT+eEd++l a++++G W++Ia +m Rt++qc rw XP_022738806.1 366 WTKEEDLRLEAAIEEHGYC-WSKIATCML-SRTDNQCWRRWK 405 ***************99.****9.*********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 931 aa Download sequence
MPTSYLQWQT SPRGFQNLHS CSLMQLKRTG LIRSFFEVSC KKITGRALSM KKDPRIQLIS 60 ARKSRTSKDL EVNDKKVTAD YGPPENSSAC NYRMALTKFP LTLQRKKWTR EEKENLEKGI 120 RQQFQERALQ FSVDWLSSSD GSSGDGSNLD NIIATVKDLE ITPEMIREFL PKVNWDQLAS 180 LYIKGRSAAE CESHWLNHED PLINRNPWTA EEDKNLLLIV QEKGIGNWFD IAVSLGSNRT 240 PFQCLARYQR SLNACILKRE WTEEEDDQLR IAVEVFGECD WQSVASTLKG RTGTQCSNRW 300 KKSLHPTRQR VGRWTHAEDK YLKVAVMLFG PKNWKKIAEV VPGRTQVQCR ERWVNSLDPA 360 LNLGIWTKEE DLRLEAAIEE HGYCWSKIAT CMLSRTDNQC WRRWKLLHPE EVPLLQEARR 420 IRKATLITNF VDRESERPAL GPNDFNISLP MITPTSEPEN TILPSKENRK ERGRRPESER 480 ENDAALRHFS ENRRHQSCGK RAQAFSVEVP GMINENEAKT ANGHDAARKK QRNPYSENNN 540 FTEPAQVVAF PKKRKRKQPS GSNNYTEAAQ HVAIQKKRRR KPPSGHTNCS DQVEDDVVQV 600 EKRKQQAESN KCIESMQDNS SSHPLSTMCM TTNQEAESFG SSLTKKMKKN PKLSLKQCSK 660 RVHAELGEEQ NSVCSENSVF SGGIDGAEVM QNSVVVVDIL GVDDASGERS TAKPGSRTKT 720 HMNLSTSQSS RITGAEGFEN FSSNKNTKKR RNSSLRQYCR RRKSNVPSGD EDDIMLASLL 780 QDKLKKRIPS FTDGDKKTPA CFLRNKLKKK RHQIVENAPL STLKGEDQSR KINQMRSGLQ 840 HCDLVISENS AFHSRLRQTI MHSDRDIGVV DVVDVVDDTV APHEVVREAS RMNEGGKLQA 900 DDITLACLRR RLKKRRLSIA QNGKTKELPL E

Sequence ? help Back to Top

Protein Sequence Length: 931 aa Download sequence

MPTSYLQWQT SPRGFQNLHS CSLMQLKRTG LIRSFFEVSC KKITGRALSM KKDPRIQLIS  60
ARKSRTSKDL EVNDKKVTAD YGPPENSSAC NYRMALTKFP LTLQRKKWTR EEKENLEKGI  120
RQQFQERALQ FSVDWLSSSD GSSGDGSNLD NIIATVKDLE ITPEMIREFL PKVNWDQLAS  180
LYIKGRSAAE CESHWLNHED PLINRNPWTA EEDKNLLLIV QEKGIGNWFD IAVSLGSNRT  240
PFQCLARYQR SLNACILKRE WTEEEDDQLR IAVEVFGECD WQSVASTLKG RTGTQCSNRW  300
KKSLHPTRQR VGRWTHAEDK YLKVAVMLFG PKNWKKIAEV VPGRTQVQCR ERWVNSLDPA  360
LNLGIWTKEE DLRLEAAIEE HGYCWSKIAT CMLSRTDNQC WRRWKLLHPE EVPLLQEARR  420
IRKATLITNF VDRESERPAL GPNDFNISLP MITPTSEPEN TILPSKENRK ERGRRPESER  480
ENDAALRHFS ENRRHQSCGK RAQAFSVEVP GMINENEAKT ANGHDAARKK QRNPYSENNN  540
FTEPAQVVAF PKKRKRKQPS GSNNYTEAAQ HVAIQKKRRR KPPSGHTNCS DQVEDDVVQV  600
EKRKQQAESN KCIESMQDNS SSHPLSTMCM TTNQEAESFG SSLTKKMKKN PKLSLKQCSK  660
RVHAELGEEQ NSVCSENSVF SGGIDGAEVM QNSVVVVDIL GVDDASGERS TAKPGSRTKT  720
HMNLSTSQSS RITGAEGFEN FSSNKNTKKR RNSSLRQYCR RRKSNVPSGD EDDIMLASLL  780
QDKLKKRIPS FTDGDKKTPA CFLRNKLKKK RHQIVENAPL STLKGEDQSR KINQMRSGLQ  840
HCDLVISENS AFHSRLRQTI MHSDRDIGVV DVVDVVDDTV APHEVVREAS RMNEGGKLQA  900
DDITLACLRR RLKKRRLSIA QNGKTKELPL E

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	552	557	KKRKRK
2	552	581	KKRKRKQPSGSNNYTEAAQHVAIQKKRRRK
3	553	582	KKRKRKQPSGSNNYTEAAQHVAIQKKRRRK
4	575	582	QKKRRRKP
5	576	581	KKRRRK
6	576	604	KKRRRKPPSGHTNCSDQVEDDVVQVEKRK
7	577	605	KKRRRKPPSGHTNCSDQVEDDVVQVEKRK
8	578	606	KKRRRKPPSGHTNCSDQVEDDVVQVEKRK
9	748	763	KKRRNSSLRQYCRRRK
10	749	764	KKRRNSSLRQYCRRRK
11	782	787	DKLKKR
12	909	917	RRRLKKRRL
13	910	918	RRRLKKRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18100.2	1e-167	MYB family protein