PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022738813.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

WRKY

Protein Properties

Length: 374aa MW: 41896.6 Da PI: 6.7172

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022738813.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	93.6	1.5e-29	133	194	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYGqK++ g+++pr+YYrCt++ gC ++k+v+rs++dp++++itY+g+H+++ XP_022738813.1 133 LDDGFSWRKYGQKDILGAKYPRGYYRCTHRnvqGCLATKQVQRSDDDPTIFDITYRGRHTCN 194 59*************************98999************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MENMGEWEQR SLINELTQGR ELARQLQVYL NVPSSSHETR ELLVQKIQAS FEKALSMLNC 60 NTSLAVDQPQ PSGLAIRMSE SPPSRSASPR SEDSDRDFKE QELKFDASKK RKTLPRWTQQ 120 VRVTPGTALE GPLDDGFSWR KYGQKDILGA KYPRGYYRCT HRNVQGCLAT KQVQRSDDDP 180 TIFDITYRGR HTCNLASHVM PPSVLSENQE QGTSIDPQQH NQQEEQTQKQ SQDLLLSFRR 240 GLKVITQDLH IREQTYPSFP NYPSSTRSNI KVENNVVFSP SVMNNNNVVG NLSPSLISPA 300 TSGSNYCSVS PSPSGMSSTH MQGNVNFPTF VPQPAEIIQA STSATNLPTV GLDFPFGNAE 360 FDPNFTFDNH GFFS

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MENMGEWEQR SLINELTQGR ELARQLQVYL NVPSSSHETR ELLVQKIQAS FEKALSMLNC  60
NTSLAVDQPQ PSGLAIRMSE SPPSRSASPR SEDSDRDFKE QELKFDASKK RKTLPRWTQQ  120
VRVTPGTALE GPLDDGFSWR KYGQKDILGA KYPRGYYRCT HRNVQGCLAT KQVQRSDDDP  180
TIFDITYRGR HTCNLASHVM PPSVLSENQE QGTSIDPQQH NQQEEQTQKQ SQDLLLSFRR  240
GLKVITQDLH IREQTYPSFP NYPSSTRSNI KVENNVVFSP SVMNNNNVVG NLSPSLISPA  300
TSGSNYCSVS PSPSGMSSTH MQGNVNFPTF VPQPAEIIQA STSATNLPTV GLDFPFGNAE  360
FDPNFTFDNH GFFS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	103	112	LKFDASKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11070.1	1e-53	WRKY family protein