PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022738945.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

G2-like

Protein Properties

Length: 430aa MW: 47288.3 Da PI: 7.706

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022738945.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.7	4.6e-32	246	299	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_022738945.1 246 PRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 299 9****************************************************7 PP
2	Myb_DNA-binding	46.9	6.5e-15	247	298	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ XP_022738945.1 247 RMRWTSSLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 298 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MSHKGDFNEQ SLNRIPDLSL HISPPNSAPS SICTGTNELD SSFDIWRKDD GIKSHSDSSV 60 KAESQADTEL SLANPASSAL EAESPWQRNS GAAADTDDHK KWHRNLLKCG NSGQLSNINH 120 GISLLDVSGL KPIKGIPVYS KCMSFPFSSS DSLLDMDPNK LRFYQTSPYS SYNCSSSASP 180 VLHSPDRYRI GGAPRFNGIS MEALRPQIHH QYTQYGATVG SSDLCNGMIR SRSIPQLHSQ 240 RNMRAPRMRW TSSLHARFVH AVELLGGHER ATPKSVLELM DVKDLTLAHV KSHLQMYRTV 300 KNTDKPAASS DGSGEEDYLP AATNTMRQNA NCSVKQRAGS PNLSIEHDNN VYGYPSTNLW 360 SKSSSRGVWS SSSRNPDEFR SEAPSSQSGN QLEVSSLAQE KILTGSNVGL HNPSLEFSLG 420 RPEWQSKERD

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MSHKGDFNEQ SLNRIPDLSL HISPPNSAPS SICTGTNELD SSFDIWRKDD GIKSHSDSSV  60
KAESQADTEL SLANPASSAL EAESPWQRNS GAAADTDDHK KWHRNLLKCG NSGQLSNINH  120
GISLLDVSGL KPIKGIPVYS KCMSFPFSSS DSLLDMDPNK LRFYQTSPYS SYNCSSSASP  180
VLHSPDRYRI GGAPRFNGIS MEALRPQIHH QYTQYGATVG SSDLCNGMIR SRSIPQLHSQ  240
RNMRAPRMRW TSSLHARFVH AVELLGGHER ATPKSVLELM DVKDLTLAHV KSHLQMYRTV  300
KNTDKPAASS DGSGEEDYLP AATNTMRQNA NCSVKQRAGS PNLSIEHDNN VYGYPSTNLW  360
SKSSSRGVWS SSSRNPDEFR SEAPSSQSGN QLEVSSLAQE KILTGSNVGL HNPSLEFSLG  420
RPEWQSKERD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	2e-54	G2-like family protein