PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022739567.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 284aa    MW: 31420.4 Da    PI: 8.394
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022739567.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.98.2e-19140194256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk+ ++tkeq   Lee F+++++++ ++++ LA++l+L  rqV vWFqNrRa+ k
  XP_022739567.1 140 RKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTK 194
                     788899***********************************************98 PP
2HD-ZIP_I/II124.64.6e-40140229191
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                     +kk+rl+keq++lLEesF+++++L+p++K++lar+L+l+prqv+vWFqnrRARtk+kq+E+d+e Lk+++++l++en+rL+ke +eL+ +l
  XP_022739567.1 140 RKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCELLKKCCETLTDENRRLQKELQELK-AL 229
                     69*************************************************************************************9.55 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MGLDDACNTG LVLGLGFSST LETPSKANNQ TPKKSPCLKF EQTATAATSF EPSLTLGLSG  60
ESYQVTATKK IDVNKGGGYL HHHEEPAAGD LYSQASPHSA VSSFSSGRVK RERDLSSEEV  120
EVEKNSSRVS DEDEDGVNAR KKLRLTKEQS ALLEESFKQH STLNPKQKQA LARQLNLRPR  180
QVEVWFQNRR ARTKLKQTEV DCELLKKCCE TLTDENRRLQ KELQELKALK LAQPFYMHMP  240
AATLTMCPSC ERIGGVGDGN SKNPFSIASK PHFYNPFTNP SAAC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1189197RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37790.17e-96HD-ZIP family protein