PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022739629.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 203aa MW: 23384.9 Da PI: 8.6881

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022739629.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	80.8	9.1e-26	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krie+ks r+vtfskR+ g++KKA EL vLCd+e a++ifss+gkly +ss XP_022739629.1 9 KRIEDKSSRHVTFSKRKSGLIKKAGELAVLCDVELALVIFSSRGKLYQFSS 59 79***********************************************96 PP
2	K-box	52.7	1.9e-18	106	171	34	99
K-box 34 eqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 Rh+ G+++e L+l +L qLe qL++ l++ R++K++++++ + elq+kek+l+++n L+kk++ XP_022739629.1 106 VGRHIEGQNIEHLNLTQLIQLEMQLDSILRQMRDRKTQVMMDTVAELQEKEKQLRQDNYVLEKKIA 171 46**************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 203 aa Download sequence
MGRGKVQLKR IEDKSSRHVT FSKRKSGLIK KAGELAVLCD VELALVIFSS RGKLYQFSSG 60 QSLRKILERY LVHVEEEAVV CTSGDEAKIH GEFMDLWKGT SLQELVGRHI EGQNIEHLNL 120 TQLIQLEMQL DSILRQMRDR KTQVMMDTVA ELQEKEKQLR QDNYVLEKKI AARMDIENGE 180 RANEDPHSNS YKPPLQRGLL HLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69120.1	7e-45	MIKC_MADS family protein