PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022739718.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 353aa MW: 39596.4 Da PI: 5.7304

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022739718.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48	2.9e-15	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd +l+ +++ G+g +W + ++++g++R++k+c++rw++yl XP_022739718.1 14 RGPWSPEEDAKLKAYIEANGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 89*********************************************97 PP
2	Myb_DNA-binding	38	3.8e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ XP_022739718.1 69 GGFSEEEDNIICSLYINIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MGRSPCCDKA NVKRGPWSPE EDAKLKAYIE ANGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDNIIC SLYINIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK 120 QRKEQQARRA SCLILKQEMK RESENYMLPG MASQVPYWPQ LPAVMPLTCT NQDPHLNDQE 180 SIRNLLIKLG GRFSEDHPQS SITTSNPMNF QYHLDVSFAQ DQLYENSMNM LSSESSISPI 240 NSTCSQVTNS THFNVNETAG PNDMFQGLDG FPAELSELIY RNNEQILDGL EGFYGTNNMV 300 DGSSTGTSSV ESSSWGDINS LGYPQIVSGF EVCQQQSMPQ VSTFDESSYF GPQ

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MGRSPCCDKA NVKRGPWSPE EDAKLKAYIE ANGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FSEEEDNIIC SLYINIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK  120
QRKEQQARRA SCLILKQEMK RESENYMLPG MASQVPYWPQ LPAVMPLTCT NQDPHLNDQE  180
SIRNLLIKLG GRFSEDHPQS SITTSNPMNF QYHLDVSFAQ DQLYENSMNM LSSESSISPI  240
NSTCSQVTNS THFNVNETAG PNDMFQGLDG FPAELSELIY RNNEQILDGL EGFYGTNNMV  300
DGSSTGTSSV ESSSWGDINS LGYPQIVSGF EVCQQQSMPQ VSTFDESSYF GPQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	3e-76	MYB family protein