PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022740009.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 308aa MW: 33405.7 Da PI: 7.9074

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022740009.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	63.2	5e-20	16	61	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd+ll ++v+++G+++W++I++ ++ gR++k+c++rw + XP_022740009.1 16 KGPWSPEEDDLLQKLVQKHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 61 79****************************.*********985 PP
2	Myb_DNA-binding	55.4	1.4e-17	70	112	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEde +++a+ ++G++ W+tIar ++ gRt++ +k++w++ XP_022740009.1 70 AFTPEEDETIIRAHVRFGNK-WATIARLLN-GRTDNAIKNHWNST 112 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 308 aa Download sequence
MAVTSTSNGK EMDRIKGPWS PEEDDLLQKL VQKHGPRNWS LISKSIPGRS GKSCRLRWCN 60 QLSPQVEHRA FTPEEDETII RAHVRFGNKW ATIARLLNGR TDNAIKNHWN STLKRKCLSV 120 GEECNFISNG GYDGNLGGEE RQPLKRSVSA GLYMSPGSPS GSDMSDSSVP VLSTSHVYKP 180 IPRTGAVNVD VNVMPAGTEA ASSSNDPPTS LSLSLPGAES CEVSTHPITE STQVRSEAKS 240 EERGGGVMGF SADFMAVMQE MIRVEVRNYM VQMQQQNGGV AGGGMGMMLD GGFRNVMAMN 300 RVGVSKIE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	1e-100	MYB family protein